RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 TTTY10Q9BZA0 68 aa13.97□□□□□ -0.17
MCF2L-217ENST00000441756 HDHD2Q9H0R4 259 aa13.97□□□□□ -0.17
MCF2L-217ENST00000441756 GALNT8Q9NY28 637 aa13.97□□□□□ -0.17
MCF2L-217ENST00000441756 ZNF629Q9UEG4 869 aaPredicted RBP13.97□□□□□ -0.17
MCF2L-217ENST00000441756 GTF3C1Q12789 2109 aa13.96□□□□□ -0.17
MCF2L-217ENST00000441756 DOCK7Q96N67 2140 aa13.96□□□□□ -0.17
MCF2L-217ENST00000441756 TLN1Q9Y490 2541 aaKnown RBP13.96□□□□□ -0.17
MCF2L-217ENST00000441756 CCRL2O00421 344 aa13.96□□□□□ -0.17
MCF2L-217ENST00000441756 DVL2O14641 736 aa13.96□□□□□ -0.17
MCF2L-217ENST00000441756 MSTNO14793 375 aa13.96□□□□□ -0.17
MCF2L-217ENST00000441756 CGAP01215 116 aa13.96□□□□□ -0.17
MCF2L-217ENST00000441756 COX5AP20674 150 aa13.96□□□□□ -0.17
MCF2L-217ENST00000441756 HOXC12P31275 282 aa13.96□□□□□ -0.17
MCF2L-217ENST00000441756 OR12D2P58182 307 aa13.96□□□□□ -0.17
MCF2L-217ENST00000441756 GRB2P62993 217 aaKnown RBP13.96□□□□□ -0.17
MCF2L-217ENST00000441756 GPR50Q13585 617 aa13.96□□□□□ -0.17
MCF2L-217ENST00000441756 TAF13Q15543 124 aa13.96□□□□□ -0.17
MCF2L-217ENST00000441756 TIMM50Q3ZCQ8 353 aa13.96□□□□□ -0.17
MCF2L-217ENST00000441756 ZNF684Q5T5D7 378 aa13.96□□□□□ -0.17
MCF2L-217ENST00000441756 OR1K1Q8NGR3 316 aa13.96□□□□□ -0.17
MCF2L-217ENST00000441756 OPALINQ96PE5 141 aa13.96□□□□□ -0.17
MCF2L-217ENST00000441756 FAM192AQ9GZU8 254 aa13.96□□□□□ -0.17
MCF2L-217ENST00000441756 ISG20L2Q9H9L3 353 aaKnown RBP13.96□□□□□ -0.17
MCF2L-217ENST00000441756 TIMM10BQ9Y5J6 103 aa13.96□□□□□ -0.17
MCF2L-217ENST00000441756 EPG5Q9HCE0 2579 aa13.96□□□□□ -0.17
MCF2L-217ENST00000441756 CIB4A0PJX0 185 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 UBL3O95164 117 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 APOC1P02654 83 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 ITGA5P08648 1049 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 PSKH1P11801 424 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 HOXB1P14653 301 aaPredicted RBP13.95□□□□□ -0.18
MCF2L-217ENST00000441756 CPEP16870 476 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 HSD11B1P28845 292 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 DCTDP32321 178 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 ARR3P36575 388 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 TGM4P49221 684 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 RGS6P49758 472 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 HIST1H3AP68431 136 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 ECH1Q13011 328 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 RAB35Q15286 201 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 TSTQ16762 297 aaKnown RBP13.95□□□□□ -0.18
MCF2L-217ENST00000441756 ZNF829Q3KNS6 432 aaPredicted RBP13.95□□□□□ -0.18
MCF2L-217ENST00000441756 HIST2H3PS2Q5TEC6 136 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 C9orf135Q5VTT2 229 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 OTPQ5XKR4 325 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 OR7E24Q6IFN5 339 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 TMEM53Q6P2H8 277 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 CORO6Q6QEF8 472 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 LRRN1Q6UXK5 716 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 HIST2H3AQ71DI3 136 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 MED12LQ86YW9 2145 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 C17orf78Q8N4C9 275 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 NAXEQ8NCW5 288 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 PELI1Q96FA3 418 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 DMRTA2Q96SC8 542 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 SH3GL3Q99963 347 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 CENPMQ9NSP4 180 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 ACOXLQ9NUZ1 547 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 SLCO1C1Q9NYB5 712 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 MRM2Q9UI43 246 aaKnown RBP13.95□□□□□ -0.18
MCF2L-217ENST00000441756 ATPIF1Q9UII2 106 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 OSGIN2Q9Y236 505 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 MEMO1Q9Y316 297 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 PIEZO2Q9H5I5 2752 aa13.95□□□□□ -0.18
MCF2L-217ENST00000441756 MAP1BP46821 2468 aaKnown RBP13.95□□□□□ -0.18
MCF2L-217ENST00000441756 DPPA5A6NC42 116 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 SGCEO43556 437 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 ABHD16AO95870 558 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 CD53P19397 219 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 PSMA1P25786 263 aaKnown RBP13.94□□□□□ -0.18
MCF2L-217ENST00000441756 CD79BP40259 229 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 OPRL1P41146 370 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 UBE2NP61088 152 aaKnown RBP13.94□□□□□ -0.18
MCF2L-217ENST00000441756 TPBGQ13641 420 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 TRAM1Q15629 374 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 ELFN2Q5R3F8 820 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 C1QTNF12Q5T7M4 302 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 LIPNQ5VXI9 398 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 MTFR2Q6P444 385 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 RPL22L1Q6P5R6 122 aaKnown RBP13.94□□□□□ -0.18
MCF2L-217ENST00000441756 CFAP77Q6ZQR2 320 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 MRGPRGQ86SM5 289 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 ALPK2Q86TB3 2170 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 P2RY8Q86VZ1 359 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 ALDH16A1Q8IZ83 802 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 GABRG1Q8N1C3 465 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 ZNF610Q8N9Z0 462 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 HTRA1Q92743 480 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 TMIGD2Q96BF3 282 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 BOD1Q96IK1 185 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 MAP6Q96JE9 813 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 AMELYQ99218 206 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 ATF6BQ99941 703 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 OPN3Q9H1Y3 402 aaPredicted RBP13.94□□□□□ -0.18
MCF2L-217ENST00000441756 MOB1AQ9H8S9 216 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 RNF121Q9H920 327 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 ELOVL3Q9HB03 270 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 DDX28Q9NUL7 540 aaKnown RBP13.94□□□□□ -0.18
MCF2L-217ENST00000441756 NDUFB11Q9NX14 153 aa13.94□□□□□ -0.18
MCF2L-217ENST00000441756 PLEK2Q9NYT0 353 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms