RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 ARID2Q68CP9 1835 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 EVPLQ92817 2033 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 RALGAPA2Q2PPJ7 1873 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 hCG_1818297A0A087WSY0 165 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 A0A1B0GTI1 187 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 C1QAP02745 245 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 C8BP07358 591 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 RHOCP08134 193 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 GPX2P18283 190 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 HTR1FP30939 366 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 CTSKP43235 329 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 NXPH1P58417 271 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 LY6KQ17RY6 165 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 OCIAD2Q56VL3 154 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 CD200R1LQ6Q8B3 271 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.4□□□□□ -0.9
SYNE2-206ENST00000441438 LYG1Q8N1E2 194 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 ASB15Q8WXK1 588 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 RPEQ96AT9 228 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 PINX1Q96BK5 328 aaKnown RBP9.4□□□□□ -0.9
SYNE2-206ENST00000441438 HPDLQ96IR7 371 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 SLC6A7Q99884 636 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 DSN1Q9H410 356 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 NIPAL2Q9H841 368 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 AMBNQ9NP70 447 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 FBXO5Q9UKT4 447 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 SF3B6Q9Y3B4 125 aaKnown RBP9.4□□□□□ -0.9
SYNE2-206ENST00000441438 C17orf100A8MU93 164 aa9.4□□□□□ -0.91
SYNE2-206ENST00000441438 NPIPB6E9PJ23 425 aa9.4□□□□□ -0.91
SYNE2-206ENST00000441438 ANXA9O76027 345 aa9.4□□□□□ -0.91
SYNE2-206ENST00000441438 HPRP00739 348 aa9.4□□□□□ -0.91
SYNE2-206ENST00000441438 MT-ND4P03905 459 aa9.4□□□□□ -0.91
SYNE2-206ENST00000441438 CHRM4P08173 479 aa9.4□□□□□ -0.91
SYNE2-206ENST00000441438 UGT2B7P16662 529 aa9.4□□□□□ -0.91
SYNE2-206ENST00000441438 GABRA5P31644 462 aa9.4□□□□□ -0.91
SYNE2-206ENST00000441438 ZNF77Q15935 545 aa9.4□□□□□ -0.91
SYNE2-206ENST00000441438 ZNF585BQ52M93 769 aa9.4□□□□□ -0.91
SYNE2-206ENST00000441438 TFDP3Q5H9I0 405 aa9.4□□□□□ -0.91
SYNE2-206ENST00000441438 C16orf89Q6UX73 402 aa9.4□□□□□ -0.91
SYNE2-206ENST00000441438 TMPRSS12Q86WS5 348 aa9.4□□□□□ -0.91
SYNE2-206ENST00000441438 C10orf107Q8IVU9 208 aa9.4□□□□□ -0.91
SYNE2-206ENST00000441438 CPNE9Q8IYJ1 553 aa9.4□□□□□ -0.91
SYNE2-206ENST00000441438 ACDQ96AP0 544 aa9.4□□□□□ -0.91
SYNE2-206ENST00000441438 SNHG12Q9BXW3 62 aa9.4□□□□□ -0.91
SYNE2-206ENST00000441438 TKTL2Q9H0I9 626 aa9.4□□□□□ -0.91
SYNE2-206ENST00000441438 TBC1D17Q9HA65 648 aa9.4□□□□□ -0.91
SYNE2-206ENST00000441438 B3GAT1Q9P2W7 334 aa9.4□□□□□ -0.91
SYNE2-206ENST00000441438 NLKQ9UBE8 527 aa9.4□□□□□ -0.91
SYNE2-206ENST00000441438 IGSF23A1L1A6 192 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 TNFRSF13BO14836 293 aaPredicted RBP9.39□□□□□ -0.91
SYNE2-206ENST00000441438 SNRPCP09234 159 aaKnown RBP9.39□□□□□ -0.91
SYNE2-206ENST00000441438 PPIAL4GP0DN37 164 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 SRD5A2P31213 254 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 SPRP35270 261 aaPredicted RBP9.39□□□□□ -0.91
SYNE2-206ENST00000441438 SNRPEP62304 92 aaKnown RBP9.39□□□□□ -0.91
SYNE2-206ENST00000441438 SLC25A3Q00325 362 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 ST3GAL3Q11203 375 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 KIAA0141Q14154 515 aaPredicted RBP9.39□□□□□ -0.91
SYNE2-206ENST00000441438 MAD2L1BPQ15013 274 aaPredicted RBP9.39□□□□□ -0.91
SYNE2-206ENST00000441438 SOHLH1Q5JUK2 328 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 SLC23A3Q6PIS1 610 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 MYLIPQ8WY64 445 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 TMEM121Q9BTD3 319 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 BEX1Q9HBH7 125 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 B3GAT2Q9NPZ5 323 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 ZFP30Q9Y2G7 519 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 ALPK3Q96L96 1907 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 TCRBV9S1A1TA0A576 114 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 A8MWP6 167 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 CHST1O43916 411 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 FARS2O95363 451 aaKnown RBP9.39□□□□□ -0.91
SYNE2-206ENST00000441438 SYNGR4O95473 234 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 DBHP09172 617 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 RAP2AP10114 183 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 CD37P11049 281 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 RAB3BP20337 219 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 NBL1P41271 181 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 MTCP1P56278 107 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 DOC2BQ14184 412 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 IL13RA2Q14627 380 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 UBXN2BQ14CS0 331 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 CRB2Q5IJ48 1285 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 ASTLQ6HA08 431 aaPredicted RBP9.39□□□□□ -0.91
SYNE2-206ENST00000441438 TMPPEQ6ZT21 453 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 TBC1D26Q86UD7 250 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 BAP18Q8IXM2 172 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 CMSS1Q9BQ75 279 aaKnown RBP9.39□□□□□ -0.91
SYNE2-206ENST00000441438 HDAC8Q9BY41 377 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 SEMA6AQ9H2E6 1030 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 GSTO2Q9H4Y5 243 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 RPF2Q9H7B2 306 aaKnown RBP9.39□□□□□ -0.91
SYNE2-206ENST00000441438 RAP2CQ9Y3L5 183 aa9.39□□□□□ -0.91
SYNE2-206ENST00000441438 FRG2CA6NGY1 282 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 TVP23AA6NH52 213 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 NPIPB5A8MRT5 1133 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 TRAPPC2LH3BP13 241 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 GRAP2O75791 330 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 GJB5O95377 273 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 HIST1H1EP10412 219 aaKnown RBP9.38□□□□□ -0.91
SYNE2-206ENST00000441438 CDKN2BP42772 138 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms