RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 CTDSP2O14595 271 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 COX5AP20674 150 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 CLLU1OSQ5K130 101 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 TMEM64Q6YI46 380 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 C17orf107Q6ZR85 190 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 SLC24A4Q8NFF2 622 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 UBTD2Q8WUN7 234 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 MED20Q9H944 212 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 DICER1Q9UPY3 1922 aaKnown RBP6.13□□□□□ -1.43
USP46-201ENST00000441222 RPL27P61353 136 aaKnown RBP6.13□□□□□ -1.43
USP46-201ENST00000441222 ZNF90Q03938 601 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 ERV3-1Q14264 604 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 PRAMEF20Q5VT98 475 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 MFSD12Q6NUT3 480 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 DCXRQ7Z4W1 244 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 PTRH1Q86Y79 214 aaKnown RBP6.13□□□□□ -1.43
USP46-201ENST00000441222 SLC38A9Q8NBW4 561 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 SLC25A46Q96AG3 418 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 PINX1Q96BK5 328 aaKnown RBP6.13□□□□□ -1.43
USP46-201ENST00000441222 PKMYT1Q99640 499 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 SORBS1Q9BX66 1292 aaKnown RBP6.13□□□□□ -1.43
USP46-201ENST00000441222 NKX6-2Q9C056 277 aaPredicted RBP6.13□□□□□ -1.43
USP46-201ENST00000441222 TMEM129A0AVI4 362 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 ZNF727A8MUV8 499 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 H3BQ06 376 aaPredicted RBP6.13□□□□□ -1.43
USP46-201ENST00000441222 XRCC2O43543 280 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 NCR1O76036 304 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 RRASP10301 218 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 SHC1P29353 583 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 CALCRP30988 508 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 RACK1P63244 317 aaKnown RBP6.13□□□□□ -1.43
USP46-201ENST00000441222 RNF151Q2KHN1 245 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 C1orf140Q5VVS0 124 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 ADAM5Q6NVV9 412 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 TMUB2Q71RG4 321 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 CMTM4Q8IZR5 234 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 OR51I2Q9H344 312 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 FAM53CQ9NYF3 392 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 KLF13Q9Y2Y9 288 aaPredicted RBP6.13□□□□□ -1.43
USP46-201ENST00000441222 USP3Q9Y6I4 520 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 ARL2-SNX15V9GYD0 113 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 P2RY10O00398 339 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 OR7C2O60412 319 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 PRSS56P0CW18 603 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 OR5I1Q13606 314 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 RPUSD3Q6P087 351 aaKnown RBP6.13□□□□□ -1.43
USP46-201ENST00000441222 GLIPR1L1Q6UWM5 242 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 SCD5Q86SK9 330 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 MEX3DQ86XN8 651 aaKnown RBP6.13□□□□□ -1.43
USP46-201ENST00000441222 HES7Q9BYE0 225 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 KIR3DX1Q9H7L2 352 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 CRLF2Q9HC73 371 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 FGF21Q9NSA1 209 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 MAST2Q6P0Q8 1798 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 LRRC37A3O60309 1634 aa6.13□□□□□ -1.43
USP46-201ENST00000441222 LGI1O95970 557 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 SOD1P00441 154 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 ADRB1P08588 477 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 ACSM4P0C7M7 580 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 CPEP16870 476 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 GPR85P60893 370 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 SHHQ15465 462 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 RNF212Q495C1 297 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 TIGD3Q6B0B8 471 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 ZNF425Q6IV72 752 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 LRP10Q7Z4F1 713 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 HSD17B11Q8NBQ5 300 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 OR2M7Q8NG81 312 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 TOX2Q96NM4 488 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 CABLES2Q9BTV7 478 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 LHX3Q9UBR4 397 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 USP22Q9UPT9 525 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 FLVCR1Q9Y5Y0 555 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 FIGNL2A6NMB9 653 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 TNFRSF10CO14798 259 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 SLCO2B1O94956 709 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 ZNF865P0CJ78 1059 aaPredicted RBP6.12□□□□□ -1.43
USP46-201ENST00000441222 ADGRF3Q8IZF5 1079 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 PNPLA1Q8N8W4 532 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 OR2AK2Q8NG84 335 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 SLC7A6Q92536 515 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 CCDC74BQ96LY2 380 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 FOXN4Q96NZ1 517 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 AAMDCQ9H7C9 122 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 POMT1Q9Y6A1 747 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 MBLAC1A4D2B0 266 aaPredicted RBP6.12□□□□□ -1.43
USP46-201ENST00000441222 TUBAL3A6NHL2 446 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 UMAD1C9J7I0 102 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 ACOT8O14734 319 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 CIDEAO60543 219 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 CSO75390 466 aaKnown RBP6.12□□□□□ -1.43
USP46-201ENST00000441222 TPOP07202 933 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 TEAD1P28347 426 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 DAPP51397 102 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 RPS25P62851 125 aaKnown RBP6.12□□□□□ -1.43
USP46-201ENST00000441222 HOXC5Q00444 222 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 HSF1Q00613 529 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 PDZK1IP1Q13113 114 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 SLC48A1Q6P1K1 146 aa6.12□□□□□ -1.43
USP46-201ENST00000441222 OR4F5Q8NH21 305 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms