RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 RFC3P40938 356 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 MOGAT2Q3SYC2 334 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 FAM209BQ5JX69 171 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 ZNF776Q68DI1 518 aaPredicted RBP8.18□□□□□ -1.1
COPB1-202ENST00000439561 AWAT2Q6E213 333 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 EIF5AL1Q6IS14 154 aaKnown RBP8.18□□□□□ -1.1
COPB1-202ENST00000439561 CORO6Q6QEF8 472 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 KLHL24Q6TFL4 600 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 LYG2Q86SG7 212 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 ADGRE4PQ86SQ3 457 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 PEG10Q86TG7 708 aaKnown RBP8.18□□□□□ -1.1
COPB1-202ENST00000439561 NAXEQ8NCW5 288 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 OR13C9Q8NGT0 318 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 NPRL2Q8WTW4 380 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 ROBO4Q8WZ75 1007 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 ISOC2Q96AB3 205 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 ST6GALNAC5Q9BVH7 336 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 TBL1XR1Q9BZK7 514 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 ESRP2Q9H6T0 727 aaKnown RBP8.18□□□□□ -1.1
COPB1-202ENST00000439561 KIR3DX1Q9H7L2 352 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 SEC61A2Q9H9S3 476 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 CREBZFQ9NS37 354 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 HHLA2Q9UM44 414 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 MDC1Q14676 2089 aaKnown RBP8.18□□□□□ -1.1
COPB1-202ENST00000439561 URB1O60287 2271 aaKnown RBP8.18□□□□□ -1.1
COPB1-202ENST00000439561 SNRNP200O75643 2136 aaKnown RBP8.18□□□□□ -1.1
COPB1-202ENST00000439561 DOCK9Q9BZ29 2069 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 TRBV23-1A0A0A0MS06 115 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 TMEM269A0A1B0GVZ9 245 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 CPED1A4D0V7 1026 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 LINC01387J3KSC0 135 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 NDUFA2O43678 99 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 ADAP1O75689 374 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 LYPD3O95274 346 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 CXCL10P02778 98 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 DAOP14920 347 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 IL12BP29460 328 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 CD96P40200 585 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 PTGFRP43088 359 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 ZP2Q05996 745 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 MEF2DQ14814 521 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 ELAVL1Q15717 326 aaKnown RBP8.18□□□□□ -1.1
COPB1-202ENST00000439561 FCRL6Q6DN72 434 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 TMEM225Q6GV28 225 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 WBP2NLQ6ICG8 309 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 MOB3CQ70IA8 216 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 MED25Q71SY5 747 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 RSRP1Q9BUV0 290 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 SLC19A3Q9BZV2 496 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 CHRDQ9H2X0 955 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 SEMA6CQ9H3T2 930 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 RHOFQ9HBH0 211 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 VSIG4Q9Y279 399 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 LSM5Q9Y4Y9 91 aaKnown RBP8.18□□□□□ -1.1
COPB1-202ENST00000439561 RAB19A4D1S5 217 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 C2orf74A8MZ97 194 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 LINC00587B1AMM8 73 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 B4DGG1 531 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 ZNF878C9JN71 531 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 ARPC3O15145 178 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 HCKP08631 526 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 H2BFMP0C1H6 154 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 GDI1P31150 447 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 TM4SF4P48230 202 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 PPP1CAP62136 330 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 KIR2DS3Q14952 304 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 TGIF1Q15583 401 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 LY6G6FQ5SQ64 297 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 LPCAT3Q6P1A2 487 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 RBMS3Q6XE24 437 aaKnown RBP8.18□□□□□ -1.1
COPB1-202ENST00000439561 SFTPA2Q8IWL1 248 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 ADAD2Q8NCV1 583 aaKnown RBP8.18□□□□□ -1.1
COPB1-202ENST00000439561 MAFIPQ8WZ33 124 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 FGGYQ96C11 551 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 AKR1E2Q96JD6 320 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 UQCC1Q9NVA1 299 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 A0A087WV62 115 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 MED19A0JLT2 244 aaPredicted RBP8.17□□□□□ -1.1
COPB1-202ENST00000439561 MPTX1A8MV57 137 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 OR2T1O43869 369 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 LRP3O75074 770 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 RNH1P13489 461 aaKnown RBP8.17□□□□□ -1.1
COPB1-202ENST00000439561 ZNF20P17024 532 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 ALOX5APP20292 161 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 C5AR1P21730 350 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 ARRB1P49407 418 aaPredicted RBP8.17□□□□□ -1.1
COPB1-202ENST00000439561 NR0B1P51843 470 aaKnown RBP8.17□□□□□ -1.1
COPB1-202ENST00000439561 CLDN6P56747 220 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 NOGQ13253 232 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 CSRP2Q16527 193 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 EIF2S3LQ2VIR3 472 aaKnown RBP8.17□□□□□ -1.1
COPB1-202ENST00000439561 LINC01590Q5TEZ4 76 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 C1QL3Q5VWW1 255 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 PRSS35Q8N3Z0 413 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 TMEM229BQ8NBD8 167 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 OR4K15Q8NH41 348 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 C16orf52Q8NHV5 167 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 NECAB3Q96P71 396 aaPredicted RBP8.17□□□□□ -1.1
COPB1-202ENST00000439561 TEX13DA0A0J9YY54 714 aaPredicted RBP8.17□□□□□ -1.1
COPB1-202ENST00000439561 LOC107986453A0A1B0GWG9 222 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms