RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 STRAPQ9Y3F4 350 aaKnown RBP1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZNF175Q9Y473 711 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 WIF1Q9Y5W5 379 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 FLVCR1Q9Y5Y0 555 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 SPACA6W5XKT8 324 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 TCHHQ07283 1943 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 ARPC4-TTLL3A0A0A6YYG9 625 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 ERICH2A1L162 156 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 C5orf51A6NDU8 294 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 B4DSR2 109 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 E9PBE3 544 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 LYNX1G3V0Z9 82 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 G3V3Y1 287 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 H0YIG0 161 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 H0YL77 283 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 KIF2AO00139 706 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 RANBP6O60518 1105 aaKnown RBP1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 NME6O75414 186 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 E2F6O75461 281 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 GMNNO75496 209 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 KLF7O75840 302 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 LY6HO94772 140 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 MFN2O95140 757 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 SLC2A10O95528 541 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 TXNDC12O95881 172 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 CAPN1P07384 714 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 CHRNGP07510 517 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 FGF4P08620 206 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 H2AFZP0C0S5 128 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 UBTFL6P0CB48 400 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 UGT1A6P19224 532 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 NT5EP21589 574 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 CALB2P22676 271 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 CCR1P32246 355 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 CYLC1P35663 651 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 ACADSBP45954 432 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 PITPNBP48739 271 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 SGSHP51688 502 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 HAND2P61296 217 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 GALK2Q01415 458 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 GABPB1Q06547 395 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 ORC2Q13416 577 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 MSLNQ13421 630 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 PDE7AQ13946 482 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 GK2Q14410 553 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 SPCS2Q15005 226 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 EXOSC7Q15024 291 aaKnown RBP1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 PDK3Q15120 406 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 PRR4Q16378 134 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 SLC36A3Q495N2 470 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 CFAP221Q4G0U5 840 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 GPAT3Q53EU6 434 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 XKR4Q5GH76 650 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 MS4A13Q5J8X5 152 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 CFAP157Q5JU67 520 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZNF691Q5VV52 312 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 IL23RQ5VWK5 629 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 MLIPQ5VWP3 458 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 RESP18Q5W5W9 173 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 UGT2A3Q6UWM9 527 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 TFAP2EQ6VUC0 442 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 PAQR9Q6ZVX9 377 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 SLC22A16Q86VW1 577 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 SERPINA12Q8IW75 414 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 BBS5Q8N3I7 341 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 FADS6Q8N9I5 356 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 MLKLQ8NB16 471 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 FAM71CQ8NEG0 241 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 WFDC9Q8NEX5 89 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 OR4A16Q8NH70 328 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 PATE1Q8WXA2 126 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 PINX1Q96BK5 328 aaKnown RBP1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 C9orf85Q96MD7 179 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 TCEANC2Q96MN5 208 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 RBM14Q96PK6 669 aaKnown RBP1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZBTB18Q99592 522 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 PITX2Q99697 317 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 PAIP2Q9BPZ3 127 aaKnown RBP1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 JPH2Q9BR39 696 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZSCAN5AQ9BUG6 496 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 WRAP53Q9BUR4 548 aaKnown RBP1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 NTMT1Q9BV86 223 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 FUNDC2Q9BWH2 189 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZNF416Q9BWM5 594 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 GPR61Q9BZJ8 451 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 NAT10Q9H0A0 1025 aaKnown RBP1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 RAB17Q9H0T7 212 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 POLD4Q9HCU8 107 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 FARSBQ9NSD9 589 aaKnown RBP1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 NRBP2Q9NSY0 501 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 RAB20Q9NX57 234 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 UTP6Q9NYH9 597 aaKnown RBP1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 TECRQ9NZ01 308 aaKnown RBP1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZNF629Q9UEG4 869 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 BCAP29Q9UHQ4 241 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 ATP6V1HQ9UI12 483 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 PSORS1C1Q9UIG5 152 aa1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 LSM7Q9UK45 103 aaKnown RBP1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZNF490Q9ULM2 529 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P18-201ENST00000438801 DIMT1Q9UNQ2 313 aaKnown RBP1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms