RNA–Protein interactions for RNA: ENST00000438120.5

PTPRF-209, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRF, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-209ENST00000438120 ARV1Q9H2C2 271 aa15.66■□□□□ 0.1
PTPRF-209ENST00000438120 PURGQ9UJV8 347 aaKnown RBP15.66■□□□□ 0.1
PTPRF-209ENST00000438120 SSUH2Q9Y2M2 353 aa15.66■□□□□ 0.1
PTPRF-209ENST00000438120 CEACAM5P06731 702 aa15.66■□□□□ 0.1
PTPRF-209ENST00000438120 RBMS3Q6XE24 437 aaKnown RBP15.66■□□□□ 0.1
PTPRF-209ENST00000438120 OR1S2Q8NGQ3 325 aa15.66■□□□□ 0.1
PTPRF-209ENST00000438120 ZFP92A6NM28 416 aa15.66■□□□□ 0.1
PTPRF-209ENST00000438120 HLA-DOBP13765 273 aa15.66■□□□□ 0.1
PTPRF-209ENST00000438120 SMAD4Q13485 552 aaKnown RBP15.66■□□□□ 0.1
PTPRF-209ENST00000438120 CYHR1Q6ZMK1 362 aa15.66■□□□□ 0.1
PTPRF-209ENST00000438120 OR1M1Q8NGA1 313 aa15.66■□□□□ 0.1
PTPRF-209ENST00000438120 A0A0B4J203 849 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 CT45A6P0DMU7 189 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 CT45A5P0DMU8 189 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 CT45A7P0DMV0 189 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 CT45A8P0DMV1 189 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 CT45A9P0DMV2 189 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 ALOX5APP20292 161 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 SRPXP78539 464 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 DUSP8Q13202 625 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 CT45A2Q5DJT8 189 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 CT45A1Q5HYN5 189 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 AGBL4Q5VU57 503 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 OR51A4Q8NGJ6 313 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 OR51A2Q8NGJ7 313 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 OR10R2Q8NGX6 335 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 CT45A3Q8NHU0 189 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 SLCO4A1Q96BD0 722 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 BCO1Q9HAY6 547 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 SLCO1B1Q9Y6L6 691 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 DDX60Q8IY21 1712 aaKnown RBP15.65■□□□□ 0.1
PTPRF-209ENST00000438120 A0A1B0GTL3 188 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 PRRG2O14669 202 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 RGS11O94810 467 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 THBS1P07996 1170 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 ACHEP22303 614 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 IL3RAP26951 378 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 FCRL6Q6DN72 434 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 FAAP20Q6NZ36 180 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 HRO43593 1189 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 RAD52P43351 418 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 PPICP45877 212 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 OR52I2Q8NH67 350 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 PTTG3PQ9NZH4 202 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 TIMM10BQ9Y5J6 103 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 ZNF816-ZNF321PA0A0X1KG74 233 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 SCGB1D1O95968 90 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 OR10J4P0C629 311 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 CLDN15P56746 228 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 ALKBH6Q3KRA9 238 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 SMIM15Q7Z3B0 74 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 ZNF321PQ8N8H1 164 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 TBX21Q9UL17 535 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 SLX4Q8IY92 1834 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 ZGLP1P0C6A0 271 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 THBS3P49746 956 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 BOD1Q96IK1 185 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 PTDSS2Q9BVG9 487 aa15.65■□□□□ 0.1
PTPRF-209ENST00000438120 NDRG4Q9ULP0 352 aaKnown RBP15.65■□□□□ 0.1
PTPRF-209ENST00000438120 OLFM2O95897 454 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 CCR9P51686 369 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 EMP3P54852 163 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 H2BFWTQ7Z2G1 175 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 FAM109AQ8N4B1 249 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 ORAI1Q96D31 301 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 LAT2Q9GZY6 243 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 SPNS1Q9H2V7 528 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 COL16A1Q07092 1604 aaPredicted RBP15.64■□□□□ 0.09
PTPRF-209ENST00000438120 SDCBPO00560 298 aaPredicted RBP15.64■□□□□ 0.09
PTPRF-209ENST00000438120 EGLN1Q9GZT9 426 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 PATZ1Q9HBE1 687 aaKnown RBP15.64■□□□□ 0.09
PTPRF-209ENST00000438120 PMS2P2O95744 297 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 IL2RAP01589 272 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 CNR1P21554 472 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 TAF1P21675 1872 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 IL10RAQ13651 578 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 ZNF439Q8NDP4 499 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 ROBO4Q8WZ75 1007 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 SLC25A46Q96AG3 418 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 PLEKHF2Q9H8W4 249 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 GPR84Q9NQS5 396 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 CMC2Q9NRP2 79 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 DSCR3O14972 297 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 AGERQ15109 404 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 Q6ZNB5 142 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 VASH2Q86V25 355 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 LGI3Q8N145 548 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 OLIG1Q8TAK6 271 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 CCR5P51681 352 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 OR10A3P58181 314 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 SLC22A13Q9Y226 551 aa15.64■□□□□ 0.09
PTPRF-209ENST00000438120 M0R135 149 aa15.63■□□□□ 0.09
PTPRF-209ENST00000438120 DGCR2P98153 550 aa15.63■□□□□ 0.09
PTPRF-209ENST00000438120 CDONQ4KMG0 1287 aa15.63■□□□□ 0.09
PTPRF-209ENST00000438120 PRSS35Q8N3Z0 413 aa15.63■□□□□ 0.09
PTPRF-209ENST00000438120 ARIH2OSQ8N7S6 290 aa15.63■□□□□ 0.09
PTPRF-209ENST00000438120 ZNF799Q96GE5 643 aa15.63■□□□□ 0.09
PTPRF-209ENST00000438120 ZNF2Q9BSG1 426 aaPredicted RBP15.63■□□□□ 0.09
PTPRF-209ENST00000438120 IL21Q9HBE4 155 aa15.63■□□□□ 0.09
PTPRF-209ENST00000438120 TMEM235A6NFC5 223 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms