RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 SLC16A14Q7RTX9 510 aa20.18■□□□□ 0.82
CPSF4-204ENST00000436336 SYT9Q86SS6 491 aa20.18■□□□□ 0.82
CPSF4-204ENST00000436336 SKA3Q8IX90 412 aa20.18■□□□□ 0.82
CPSF4-204ENST00000436336 GABRG1Q8N1C3 465 aa20.18■□□□□ 0.82
CPSF4-204ENST00000436336 GJC3Q8NFK1 279 aa20.18■□□□□ 0.82
CPSF4-204ENST00000436336 OR1K1Q8NGR3 316 aa20.18■□□□□ 0.82
CPSF4-204ENST00000436336 RND1Q92730 232 aa20.18■□□□□ 0.82
CPSF4-204ENST00000436336 FBXO17Q96EF6 278 aa20.18■□□□□ 0.82
CPSF4-204ENST00000436336 PIGMQ9H3S5 423 aa20.18■□□□□ 0.82
CPSF4-204ENST00000436336 ISYNA1Q9NPH2 558 aa20.18■□□□□ 0.82
CPSF4-204ENST00000436336 IKZF2Q9UKS7 526 aa20.18■□□□□ 0.82
CPSF4-204ENST00000436336 IGSF10Q6WRI0 2623 aa20.18■□□□□ 0.82
CPSF4-204ENST00000436336 POLEQ07864 2286 aa20.17■□□□□ 0.82
CPSF4-204ENST00000436336 METTL15A6NJ78 407 aa20.17■□□□□ 0.82
CPSF4-204ENST00000436336 MAGEB4O15481 346 aaPredicted RBP20.17■□□□□ 0.82
CPSF4-204ENST00000436336 TACSTD2P09758 323 aa20.17■□□□□ 0.82
CPSF4-204ENST00000436336 HSMCR30P0CW71 290 aa20.17■□□□□ 0.82
CPSF4-204ENST00000436336 COX5AP20674 150 aa20.17■□□□□ 0.82
CPSF4-204ENST00000436336 MLLT11Q13015 90 aaPredicted RBP20.17■□□□□ 0.82
CPSF4-204ENST00000436336 MRPL49Q13405 166 aaKnown RBP20.17■□□□□ 0.82
CPSF4-204ENST00000436336 DOC2BQ14184 412 aa20.17■□□□□ 0.82
CPSF4-204ENST00000436336 RHOUQ7L0Q8 258 aa20.17■□□□□ 0.82
CPSF4-204ENST00000436336 VASH1Q7L8A9 365 aaPredicted RBP20.17■□□□□ 0.82
CPSF4-204ENST00000436336 FAM220AQ7Z4H9 259 aa20.17■□□□□ 0.82
CPSF4-204ENST00000436336 ZNF679Q8IYX0 411 aa20.17■□□□□ 0.82
CPSF4-204ENST00000436336 RNF133Q8WVZ7 376 aa20.17■□□□□ 0.82
CPSF4-204ENST00000436336 SLAMF6Q96DU3 332 aa20.17■□□□□ 0.82
CPSF4-204ENST00000436336 MROQ9BYG7 248 aa20.17■□□□□ 0.82
CPSF4-204ENST00000436336 BABAM2Q9NXR7 383 aa20.17■□□□□ 0.82
CPSF4-204ENST00000436336 MRM2Q9UI43 246 aaKnown RBP20.17■□□□□ 0.82
CPSF4-204ENST00000436336 GNG8Q9UK08 70 aa20.17■□□□□ 0.82
CPSF4-204ENST00000436336 PSMD9O00233 223 aa20.16■□□□□ 0.82
CPSF4-204ENST00000436336 PCBD1P61457 104 aa20.16■□□□□ 0.82
CPSF4-204ENST00000436336 HIST1H3AP68431 136 aa20.16■□□□□ 0.82
CPSF4-204ENST00000436336 HIST2H3PS2Q5TEC6 136 aa20.16■□□□□ 0.82
CPSF4-204ENST00000436336 DEGS2Q6QHC5 323 aa20.16■□□□□ 0.82
CPSF4-204ENST00000436336 CFAP77Q6ZQR2 320 aa20.16■□□□□ 0.82
CPSF4-204ENST00000436336 NCCRP1Q6ZVX7 275 aaPredicted RBP20.16■□□□□ 0.82
CPSF4-204ENST00000436336 HIST2H3AQ71DI3 136 aa20.16■□□□□ 0.82
CPSF4-204ENST00000436336 GPR141Q7Z602 305 aa20.16■□□□□ 0.82
CPSF4-204ENST00000436336 KRT77Q7Z794 578 aa20.16■□□□□ 0.82
CPSF4-204ENST00000436336 KLBQ86Z14 1044 aa20.16■□□□□ 0.82
CPSF4-204ENST00000436336 OR13F1Q8NGS4 319 aa20.16■□□□□ 0.82
CPSF4-204ENST00000436336 TMIGD2Q96BF3 282 aa20.16■□□□□ 0.82
CPSF4-204ENST00000436336 SLCO1C1Q9NYB5 712 aa20.16■□□□□ 0.82
CPSF4-204ENST00000436336 MSTNO14793 375 aa20.16■□□□□ 0.82
CPSF4-204ENST00000436336 TTKP33981 857 aa20.16■□□□□ 0.82
CPSF4-204ENST00000436336 BDH1Q02338 343 aa20.16■□□□□ 0.82
CPSF4-204ENST00000436336 P2RY6Q15077 328 aa20.16■□□□□ 0.82
CPSF4-204ENST00000436336 ARMCX4Q5H9R4 360 aa20.16■□□□□ 0.82
CPSF4-204ENST00000436336 LRRN1Q6UXK5 716 aa20.16■□□□□ 0.82
CPSF4-204ENST00000436336 SATL1Q86VE3 508 aa20.16■□□□□ 0.82
CPSF4-204ENST00000436336 ZNF433Q8N7K0 673 aaPredicted RBP20.16■□□□□ 0.82
CPSF4-204ENST00000436336 YIPF7Q8N8F6 280 aa20.16■□□□□ 0.82
CPSF4-204ENST00000436336 HAVCR2Q8TDQ0 301 aa20.16■□□□□ 0.82
CPSF4-204ENST00000436336 TRIM36Q9NQ86 728 aa20.16■□□□□ 0.82
CPSF4-204ENST00000436336 BATF3Q9NR55 127 aa20.16■□□□□ 0.82
CPSF4-204ENST00000436336 A0A096LPE4 126 aa20.15■□□□□ 0.82
CPSF4-204ENST00000436336 A0A1W2PPZ6 126 aa20.15■□□□□ 0.82
CPSF4-204ENST00000436336 CCL21O00585 134 aa20.15■□□□□ 0.82
CPSF4-204ENST00000436336 DVL2O14641 736 aa20.15■□□□□ 0.82
CPSF4-204ENST00000436336 RER1O15258 196 aa20.15■□□□□ 0.82
CPSF4-204ENST00000436336 ZNF254O75437 659 aa20.15■□□□□ 0.82
CPSF4-204ENST00000436336 ABHD16AO95870 558 aa20.15■□□□□ 0.82
CPSF4-204ENST00000436336 WNT11O96014 354 aa20.15■□□□□ 0.82
CPSF4-204ENST00000436336 LALBAP00709 142 aa20.15■□□□□ 0.82
CPSF4-204ENST00000436336 BMP5P22003 454 aa20.15■□□□□ 0.82
CPSF4-204ENST00000436336 SCRN3Q0VDG4 424 aa20.15■□□□□ 0.82
CPSF4-204ENST00000436336 MRPL28Q13084 256 aaKnown RBP20.15■□□□□ 0.82
CPSF4-204ENST00000436336 SLC36A2Q495M3 483 aa20.15■□□□□ 0.82
CPSF4-204ENST00000436336 GALNT11Q8NCW6 608 aa20.15■□□□□ 0.82
CPSF4-204ENST00000436336 OR10S1Q8NGN2 331 aa20.15■□□□□ 0.82
CPSF4-204ENST00000436336 BCL2L2Q92843 193 aaPredicted RBP20.15■□□□□ 0.82
CPSF4-204ENST00000436336 PELI1Q96FA3 418 aa20.15■□□□□ 0.82
CPSF4-204ENST00000436336 OPALINQ96PE5 141 aa20.15■□□□□ 0.82
CPSF4-204ENST00000436336 BBC3Q96PG8 261 aaPredicted RBP20.15■□□□□ 0.82
CPSF4-204ENST00000436336 ACOXLQ9NUZ1 547 aa20.15■□□□□ 0.82
CPSF4-204ENST00000436336 ZNF878C9JN71 531 aa20.14■□□□□ 0.81
CPSF4-204ENST00000436336 ZNF32P17041 273 aa20.14■□□□□ 0.81
CPSF4-204ENST00000436336 GBX2P52951 348 aaPredicted RBP20.14■□□□□ 0.81
CPSF4-204ENST00000436336 TAS2R43P59537 309 aa20.14■□□□□ 0.81
CPSF4-204ENST00000436336 SPATC1Q76KD6 591 aa20.14■□□□□ 0.81
CPSF4-204ENST00000436336 DPPA2Q7Z7J5 298 aa20.14■□□□□ 0.81
CPSF4-204ENST00000436336 MRGPRGQ86SM5 289 aa20.14■□□□□ 0.81
CPSF4-204ENST00000436336 C1orf162Q8NEQ5 155 aaPredicted RBP20.14■□□□□ 0.81
CPSF4-204ENST00000436336 BOD1Q96IK1 185 aa20.14■□□□□ 0.81
CPSF4-204ENST00000436336 ELOVL3Q9HB03 270 aa20.14■□□□□ 0.81
CPSF4-204ENST00000436336 PNRC2Q9NPJ4 139 aaKnown RBP20.14■□□□□ 0.81
CPSF4-204ENST00000436336 CENPMQ9NSP4 180 aa20.14■□□□□ 0.81
CPSF4-204ENST00000436336 ZNF224Q9NZL3 707 aa20.14■□□□□ 0.81
CPSF4-204ENST00000436336 LRP12Q9Y561 859 aa20.14■□□□□ 0.81
CPSF4-204ENST00000436336 TIMM10BQ9Y5J6 103 aa20.14■□□□□ 0.81
CPSF4-204ENST00000436336 CIB4A0PJX0 185 aa20.13■□□□□ 0.81
CPSF4-204ENST00000436336 LYZL6O75951 148 aa20.13■□□□□ 0.81
CPSF4-204ENST00000436336 H2BFMP0C1H6 154 aa20.13■□□□□ 0.81
CPSF4-204ENST00000436336 OPRL1P41146 370 aa20.13■□□□□ 0.81
CPSF4-204ENST00000436336 RIDAP52758 137 aaKnown RBP20.13■□□□□ 0.81
CPSF4-204ENST00000436336 GABRA6Q16445 453 aa20.13■□□□□ 0.81
CPSF4-204ENST00000436336 LIPNQ5VXI9 398 aa20.13■□□□□ 0.81
CPSF4-204ENST00000436336 MYO7BQ6PIF6 2116 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms