RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 RNF215Q9Y6U7 377 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 MED12Q93074 2177 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 CDC40O60508 579 aaKnown RBP eCLIP9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 FOLR1P15328 257 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 ABCD3P28288 659 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 SNRPEP62304 92 aaKnown RBP9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 HFEQ30201 348 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 PCGF3Q3KNV8 242 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 FAM74A1Q5RGS3 127 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 OR7E24Q6IFN5 339 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 C17orf82Q86X59 251 aaPredicted RBP9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 TSEN15Q8WW01 171 aaKnown RBP9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 COMMD4Q9H0A8 199 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 ZNF275Q9NSD4 429 aaPredicted RBP9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 AKAP7Q9P0M2 348 aaPredicted RBP9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 STEAP1Q9UHE8 339 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 TINAGQ9UJW2 476 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 NUP210LQ5VU65 1888 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 A0A1B0GTQ1 180 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 PRSS37A4D1T9 235 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 TMEM212A6NML5 194 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 CTAG2O75638 210 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 HTR3BO95264 441 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 NMBP08949 121 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 SPARCP09486 303 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 POU3F4P49335 361 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 AP3S2P59780 193 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 EGR3Q06889 387 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 PLCXD2Q0VAA5 305 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 SQSTM1Q13501 440 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 CCDC157Q569K6 752 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 METTL11BQ5VVY1 283 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 SYT13Q7L8C5 426 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 CBLN2Q8IUK8 224 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 SPAG16Q8N0X2 631 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 OR4C16Q8NGL9 310 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 DVL3Q92997 716 aaPredicted RBP9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 OR8B4Q96RC9 309 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 ADAT1Q9BUB4 502 aaKnown RBP9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 DUSP15Q9H1R2 295 aaPredicted RBP9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 COA4Q9NYJ1 87 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 ASCC3Q8N3C0 2202 aaKnown RBP9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 TRAV36DV7A0A075B6V5 113 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 ZNF354AO60765 605 aaPredicted RBP9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 EIF3GO75821 320 aaKnown RBP eCLIP9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 NDUFB6O95139 128 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 CXCL2P19875 107 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 PTAFRP25105 342 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 SLC17A1Q14916 467 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 C11orf88Q6PI97 169 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 RBMS3Q6XE24 437 aaKnown RBP9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 DNM1P46Q6ZS02 220 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 OR1M1Q8NGA1 313 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 OR6S1Q8NH40 331 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 GINS4Q9BRT9 223 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 TBL1XR1Q9BZK7 514 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 WWTR1Q9GZV5 400 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 PTTG3PQ9NZH4 202 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 ETV7Q9Y603 341 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 MUC3AQ02505 3323 aa9.36□□□□□ -0.91
CLSTN1-203ENST00000435891 NAP1L6A6NFF2 107 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 GGT3PA6NGU5 568 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 ALG1L2C9J202 215 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 D6RAR5 112 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 XKRYO14609 159 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 ADAM10O14672 748 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 XRCC3O43542 346 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 SUSD5O60279 629 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 ELAVL1Q15717 326 aaKnown RBP9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 OVCH2Q7RTZ1 564 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 ZNF417Q8TAU3 575 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 ZNF519Q8TB69 540 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 GPR119Q8TDV5 335 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 DUSP19Q8WTR2 217 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 MYEF2Q9P2K5 600 aaKnown RBP9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 FBXL3Q9UKT7 428 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 FREM2Q5SZK8 3169 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 TRAV18A0A075B6X5 111 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 TMED7-TICAM2A0A0A6YYA0 188 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 IGLV1-36A0A0B4J1U3 117 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 H7C417 338 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 NPIPB7O75200 414 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 SPP1P10451 314 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 BIKQ13323 160 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 ZNF124Q15973 351 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 C2orf76Q3KRA6 126 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 TMEM205Q6UW68 189 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 ZNF227Q86WZ6 799 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 THAP6Q8TBB0 222 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 CA5BP1Q8WTZ4 195 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 ZC3H10Q96K80 434 aaKnown RBP9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 VN1R1Q9GZP7 353 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 UCK1Q9HA47 277 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 LMAN1LQ9HAT1 526 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 MTFP1Q9UDX5 166 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 NDRG3Q9UGV2 375 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 MKL2Q9ULH7 1088 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 ATXN7L1Q9ULK2 861 aaPredicted RBP9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 TMED7Q9Y3B3 224 aa9.35□□□□□ -0.91
CLSTN1-203ENST00000435891 MMACHCQ9Y4U1 282 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms