RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 CFIP05156 583 aa16.62■□□□□ 0.25
CLK1-205ENST00000434813 GIPP09681 153 aaPredicted RBP16.62■□□□□ 0.25
CLK1-205ENST00000434813 HTR2CP28335 458 aa16.62■□□□□ 0.25
CLK1-205ENST00000434813 ZNF81P51508 661 aa16.62■□□□□ 0.25
CLK1-205ENST00000434813 DCDP81605 110 aaKnown RBP16.62■□□□□ 0.25
CLK1-205ENST00000434813 GUSBP11Q6P575 273 aa16.62■□□□□ 0.25
CLK1-205ENST00000434813 MEIOBQ8N635 442 aa16.62■□□□□ 0.25
CLK1-205ENST00000434813 OR5L2Q8NGL0 311 aa16.62■□□□□ 0.25
CLK1-205ENST00000434813 OR6M1Q8NGM8 313 aa16.62■□□□□ 0.25
CLK1-205ENST00000434813 EIF3KQ9UBQ5 218 aaKnown RBP16.62■□□□□ 0.25
CLK1-205ENST00000434813 FREM3P0C091 2139 aa16.62■□□□□ 0.25
CLK1-205ENST00000434813 LOC107986453A0A1B0GWG9 222 aa16.62■□□□□ 0.25
CLK1-205ENST00000434813 SLC22A5O76082 557 aa16.62■□□□□ 0.25
CLK1-205ENST00000434813 PRSS3P35030 304 aa16.62■□□□□ 0.25
CLK1-205ENST00000434813 HLA-BQ31612 363 aa16.62■□□□□ 0.25
CLK1-205ENST00000434813 SLC25A53Q5H9E4 307 aa16.62■□□□□ 0.25
CLK1-205ENST00000434813 ZNF385CQ66K41 422 aaPredicted RBP16.62■□□□□ 0.25
CLK1-205ENST00000434813 ZNF704Q6ZNC4 412 aaPredicted RBP16.62■□□□□ 0.25
CLK1-205ENST00000434813 KLRF1Q9NZS2 232 aa16.62■□□□□ 0.25
CLK1-205ENST00000434813 OR52A1Q9UKL2 312 aa16.62■□□□□ 0.25
CLK1-205ENST00000434813 RARRES3Q9UL19 164 aa16.62■□□□□ 0.25
CLK1-205ENST00000434813 B3GALT5Q9Y2C3 310 aa16.62■□□□□ 0.25
CLK1-205ENST00000434813 CACNA1CQ13936 2221 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 IGKV1D-43A0A0B4J1Z2 117 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 LY6G6EA0A0G2JKS1 128 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 MEGF11A6BM72 1044 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 PYCARD-AS1I3L0S3 204 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 NOS1APO75052 506 aaPredicted RBP16.61■□□□□ 0.25
CLK1-205ENST00000434813 ONECUT2O95948 504 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 AKAIN1P0CW23 69 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 MSX1P28360 303 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 ZNF41P51814 821 aaPredicted RBP16.61■□□□□ 0.25
CLK1-205ENST00000434813 EMP2P54851 167 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 DHODHQ02127 395 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 GUCA2AQ02747 115 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 NR0B2Q15466 257 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 BPHLQ86WA6 291 aaPredicted RBP16.61■□□□□ 0.25
CLK1-205ENST00000434813 LINC00346Q8IVM7 164 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 OR13C3Q8NGS6 347 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 OR6N1Q8NGY5 312 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 GPX8Q8TED1 209 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 SAP25Q8TEE9 199 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 MRGPRX4Q96LA9 322 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 C5orf34Q96MH7 638 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 ATG5Q9H1Y0 275 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 FSCN3Q9NQT6 498 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 CA10Q9NS85 328 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 MED29Q9NX70 200 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 PIPOXQ9P0Z9 390 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 PPP4R1LQ9P1A2 415 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 KLHL13Q9P2N7 655 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 U3KQA8 63 aa16.61■□□□□ 0.25
CLK1-205ENST00000434813 IGLV3-32A0A0A0MS00 114 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 A0A1W2PQM1 296 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 UBCP0CG48 685 aaKnown RBP16.6■□□□□ 0.25
CLK1-205ENST00000434813 GABRA1P14867 456 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 DNASE1L1P49184 302 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 GLYATL3Q5SZD4 288 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 CPEB2Q7Z5Q1 589 aaKnown RBP16.6■□□□□ 0.25
CLK1-205ENST00000434813 ADGRE4PQ86SQ3 457 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 MAML2Q8IZL2 1156 aaPredicted RBP16.6■□□□□ 0.25
CLK1-205ENST00000434813 CLEC1AQ8NC01 280 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 RNF133Q8WVZ7 376 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 GINS4Q9BRT9 223 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 A0A1W2PQ72 361 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 LOC390937A0A1W2PQ73 354 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 CPED1A4D0V7 1026 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 SULT1C2O00338 296 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 YKT6O15498 198 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 TOXO94900 526 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 GTF2F2P13984 249 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 PTGDSP41222 190 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 OR3A3P47888 321 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 ACTBP60709 375 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 ACTG1P63261 375 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 CSRP2Q16527 193 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 PLPPR5Q32ZL2 321 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 TMEM244Q5VVB8 128 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 SLC36A1Q7Z2H8 476 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 FTMTQ8N4E7 242 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 NKAIN3Q8N8D7 197 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 OR4D10Q8NGI6 311 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 OR51A2Q8NGJ7 313 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 SPSB2Q99619 263 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 GAREM1Q9H706 876 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 SERINC1Q9NRX5 453 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 PISDQ9UG56 409 aa16.6■□□□□ 0.25
CLK1-205ENST00000434813 CACNA1EQ15878 2313 aa16.59■□□□□ 0.25
CLK1-205ENST00000434813 CABIN1Q9Y6J0 2220 aa16.59■□□□□ 0.25
CLK1-205ENST00000434813 IGHV5-10-1A0A0J9YXX1 117 aa16.59■□□□□ 0.25
CLK1-205ENST00000434813 TMEM269A0A1B0GVZ9 245 aa16.59■□□□□ 0.25
CLK1-205ENST00000434813 OR2M5A3KFT3 312 aa16.59■□□□□ 0.25
CLK1-205ENST00000434813 H3BML4 177 aa16.59■□□□□ 0.25
CLK1-205ENST00000434813 OR2A4O95047 310 aa16.59■□□□□ 0.25
CLK1-205ENST00000434813 VSIG10L2P0DP72 767 aa16.59■□□□□ 0.25
CLK1-205ENST00000434813 SSTR2P30874 369 aa16.59■□□□□ 0.25
CLK1-205ENST00000434813 MMP16P51512 607 aa16.59■□□□□ 0.25
CLK1-205ENST00000434813 RAP2BP61225 183 aa16.59■□□□□ 0.25
CLK1-205ENST00000434813 FAM198BQ6UWH4 519 aa16.59■□□□□ 0.25
CLK1-205ENST00000434813 OR2A7Q96R45 310 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms