RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 GABRG1Q8N1C3 465 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 CLEC1AQ8NC01 280 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 SLC22A8Q8TCC7 542 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 ST7LQ8TDW4 575 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 RNF133Q8WVZ7 376 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 CLDN23Q96B33 292 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 SLC25A21Q9BQT8 299 aaPredicted RBP9.33□□□□□ -0.92
CD44-210ENST00000434472 CHIAQ9BZP6 476 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 TTYH1Q9H313 450 aaPredicted RBP9.33□□□□□ -0.92
CD44-210ENST00000434472 APMAPQ9HDC9 416 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 MYOZ1Q9NP98 299 aaPredicted RBP9.33□□□□□ -0.92
CD44-210ENST00000434472 KLRF1Q9NZS2 232 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 MED11Q9P086 117 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 KLHL13Q9P2N7 655 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 CPAMD8Q8IZJ3 1885 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 LOC390937A0A1W2PQ73 354 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 PLSCR5A0PG75 271 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 G3V3Q6 166 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 L7N2F9 121 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 LDLRAD4O15165 306 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 RAD1O60671 282 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 SCRG1O75711 98 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 MPZL1O95297 269 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 RLN1P04808 185 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 VSIG10L2P0DP72 767 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 IL11P20809 199 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 NFYAP23511 347 aaPredicted RBP9.32□□□□□ -0.92
CD44-210ENST00000434472 HSD11B1P28845 292 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 EXOSC2Q13868 293 aaKnown RBP9.32□□□□□ -0.92
CD44-210ENST00000434472 SHBQ15464 509 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 GLYATL3Q5SZD4 288 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 THEM4Q5T1C6 240 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 ASPHD2Q6ICH7 369 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 FAAP20Q6NZ36 180 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 LYPD8Q6UX82 237 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 CPEB2Q7Z5Q1 589 aaKnown RBP9.32□□□□□ -0.92
CD44-210ENST00000434472 PLPP7Q8NBV4 271 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 EDAQ92838 391 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 PPP1R14AQ96A00 147 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 PNPLA2Q96AD5 504 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 ARL5BQ96KC2 179 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 OR6C1Q96RD1 312 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 MOB1AQ9H8S9 216 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 RAB22AQ9UL26 194 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 RPH3AQ9Y2J0 694 aaPredicted RBP9.32□□□□□ -0.92
CD44-210ENST00000434472 PCDH15Q96QU1 1955 aa9.32□□□□□ -0.92
CD44-210ENST00000434472 METTL21EPA6NDL7 271 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 OR6C65A6NJZ3 312 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 HMSDA8MTL9 139 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 DOK2O60496 412 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 KDM4BO94953 1096 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 RAB3DO95716 219 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 PMS2P2O95744 297 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 ITGB2P05107 769 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 MYF5P13349 255 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 FOSL2P15408 326 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 LAP3P28838 519 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 SSTR2P30874 369 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 AP2S1P53680 142 aaPredicted RBP9.31□□□□□ -0.92
CD44-210ENST00000434472 GUCA2AQ02747 115 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 GRK1Q15835 563 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 PHF19Q5T6S3 580 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 OR5M10Q6IEU7 315 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 ZNF574Q6ZN55 896 aaPredicted RBP9.31□□□□□ -0.92
CD44-210ENST00000434472 ZNF627Q7L945 461 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 MDGA2Q7Z553 956 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 BIVMQ86UB2 503 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 BPHLQ86WA6 291 aaPredicted RBP9.31□□□□□ -0.92
CD44-210ENST00000434472 CCDC28AQ8IWP9 274 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 UEVLDQ8IX04 471 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 ELMOD2Q8IZ81 293 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 KDM8Q8N371 416 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 JAGN1Q8N5M9 183 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 OR2AK2Q8NG84 335 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 OR51S1Q8NGJ8 323 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 FAM46BQ96A09 425 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 SLAMF6Q96DU3 332 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 SEH1LQ96EE3 360 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 C1orf198Q9H425 327 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 EXO5Q9H790 373 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 METTL7AQ9H8H3 244 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 CA10Q9NS85 328 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 CPED1A4D0V7 1026 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 C2orf72A6NCS6 295 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 DISC1C4P0D8 188 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 F5H5P2 479 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 MPC2O95563 127 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 CD74P04233 296 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 CD3DP04234 171 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 ERCC1P07992 297 aaPredicted RBP9.31□□□□□ -0.92
CD44-210ENST00000434472 EPHA8P29322 1005 aaPredicted RBP9.31□□□□□ -0.92
CD44-210ENST00000434472 BDKRB2P30411 391 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 BIDP55957 195 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 CLRN1P58418 232 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 GMFBP60983 142 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 FMODQ06828 376 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 PMPCAQ10713 525 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 MEF2DQ14814 521 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 ZMYND11Q15326 602 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 PLPPR5Q32ZL2 321 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms