RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 TMEM129A0AVI4 362 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 TVP23AA6NH52 213 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 C12orf71A8MTZ7 269 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 B9A039 149 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 ARPC3O15145 178 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 AHCYL1O43865 530 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 ENTPD5O75356 428 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 TXNDC12O95881 172 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 CLPTM1O96005 669 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 NGFP01138 241 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 PTHP01270 115 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 TP53P04637 393 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 GYPBP06028 91 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 ADRA2AP08913 450 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 CST2P09228 141 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 MSR1P21757 451 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 CRABP1P29762 137 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 PYCR1P32322 319 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 GSK3AP49840 483 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 GDI2P50395 445 aaKnown RBP4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 UCP2P55851 309 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 PCBD1P61457 104 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 SNRPD2P62316 118 aaKnown RBP4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 TEKQ02763 1124 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 TNK1Q13470 666 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 GINS1Q14691 196 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 CARTPTQ16568 116 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 MSMPQ1L6U9 139 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 CLEC12BQ2HXU8 276 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 TBC1D28Q2M2D7 210 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 C3orf36Q3SXR2 165 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 SLC36A3Q495N2 470 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 ZNF362Q5T0B9 420 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 SPATA46Q5T0L3 261 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 TMEM236Q5W0B7 351 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 C11orf71Q6IPW1 123 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 RGS7BPQ6MZT1 257 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 CORO6Q6QEF8 472 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 ZNF620Q6ZNG0 422 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 RASSF6Q6ZTQ3 369 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 LINC00346Q8IVM7 164 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 IQCF1Q8N6M8 205 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 SLC37A3Q8NCC5 494 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 MAPK1IP1LQ8NDC0 245 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 PAPD5Q8NDF8 572 aaKnown RBP4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 OR10H5Q8NGA6 315 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 OR9Q1Q8NGQ5 310 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 OR1J2Q8NGS2 313 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 OR1J1Q8NGS3 322 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 OR4Q3Q8NH05 313 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 LRTOMTQ8WZ04 291 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 SLC7A6Q92536 515 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 GPX7Q96SL4 187 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 SMR3AQ99954 134 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 SYT3Q9BQG1 590 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 SSBP4Q9BWG4 385 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 DGCR6LQ9BY27 220 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 MRPL37Q9BZE1 423 aaKnown RBP4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 OR2H1Q9GZK4 316 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 WNT5BQ9H1J7 359 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 MMADHCQ9H3L0 296 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 YY1AP1Q9H869 796 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 ZNF556Q9HAH1 456 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 NTN4Q9HB63 628 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 MOV10Q9HCE1 1003 aaKnown RBP4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 ZNF701Q9NV72 531 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 IL20Q9NYY1 176 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 VSX1Q9NZR4 365 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 MYEF2Q9P2K5 600 aaKnown RBP4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 EIF3KQ9UBQ5 218 aaKnown RBP4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 DNAJB9Q9UBS3 223 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 REV1Q9UBZ9 1251 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 CMAHPQ9Y471 501 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 AP4S1Q9Y587 144 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 CDH10Q9Y6N8 788 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 FAM183AA6NL82 134 aa4.96□□□□□ -1.62
HMGB3P24-201ENST00000433260 LYNX1G3V0Z9 82 aa4.96□□□□□ -1.62
HMGB3P24-201ENST00000433260 G3V2T6 193 aa4.96□□□□□ -1.62
HMGB3P24-201ENST00000433260 H7C1Q1 480 aa4.96□□□□□ -1.62
HMGB3P24-201ENST00000433260 BHLHE40O14503 412 aa4.96□□□□□ -1.62
HMGB3P24-201ENST00000433260 RER1O15258 196 aa4.96□□□□□ -1.62
HMGB3P24-201ENST00000433260 SGCEO43556 437 aa4.96□□□□□ -1.62
HMGB3P24-201ENST00000433260 IDH3BO43837 385 aa4.96□□□□□ -1.62
HMGB3P24-201ENST00000433260 DOK2O60496 412 aa4.96□□□□□ -1.62
HMGB3P24-201ENST00000433260 MITFO75030 526 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P24-201ENST00000433260 HTR3BO95264 441 aa4.96□□□□□ -1.62
HMGB3P24-201ENST00000433260 TFP02787 698 aa4.96□□□□□ -1.62
HMGB3P24-201ENST00000433260 H2AFB1P0C5Y9 115 aa4.96□□□□□ -1.62
HMGB3P24-201ENST00000433260 H2AFB2P0C5Z0 115 aa4.96□□□□□ -1.62
HMGB3P24-201ENST00000433260 LYNX1P0DP58 116 aa4.96□□□□□ -1.62
HMGB3P24-201ENST00000433260 CLUP10909 449 aa4.96□□□□□ -1.62
HMGB3P24-201ENST00000433260 NAT2P11245 290 aa4.96□□□□□ -1.62
HMGB3P24-201ENST00000433260 APEHP13798 732 aaKnown RBP4.96□□□□□ -1.62
HMGB3P24-201ENST00000433260 ANXA8P13928 327 aa4.96□□□□□ -1.62
HMGB3P24-201ENST00000433260 ZNF823P16415 610 aa4.96□□□□□ -1.62
HMGB3P24-201ENST00000433260 ATF4P18848 351 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P24-201ENST00000433260 FASP25445 335 aa4.96□□□□□ -1.62
HMGB3P24-201ENST00000433260 GLRXP35754 106 aa4.96□□□□□ -1.62
HMGB3P24-201ENST00000433260 RPS27P42677 84 aaKnown RBP4.96□□□□□ -1.62
HMGB3P24-201ENST00000433260 RAD52P43351 418 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms