RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 WNT4P56705 351 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 PRPS1P60891 318 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 FKBP1AP62942 108 aaKnown RBP2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 SPAG1Q07617 926 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 ARFRP1Q13795 201 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 LRRC26Q2I0M4 334 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 ANXA8L1Q5VT79 327 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 MFSD14CQ5VZR4 134 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 COPS6Q7L5N1 327 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 MMAAQ8IVH4 418 aaKnown RBP2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 OFCC1Q8IZS5 231 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 IQCKQ8N0W5 287 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 PDIK1LQ8N165 341 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 CCDC148Q8NFR7 591 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 OR4F15Q8NGB8 312 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 OR2G3Q8NGZ4 309 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 OR2G2Q8NGZ5 317 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 NDRG1Q92597 394 aaKnown RBP2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 STMN2Q93045 179 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 OR2M2Q96R28 347 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 NRTNQ99748 197 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 ATP5SQ99766 215 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 SH3GL3Q99963 347 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 RARRES2Q99969 163 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 MRPS30Q9NP92 439 aaKnown RBP2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 KIAA1257Q9ULG3 409 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 PACSIN2Q9UNF0 486 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 PRG3Q9Y2Y8 225 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 F11RQ9Y624 299 aaKnown RBP2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 ZNFX1Q9P2E3 1918 aaKnown RBP2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 WDR19Q8NEZ3 1342 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 RBBP6Q7Z6E9 1792 aaKnown RBP2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 DENND4AQ7Z401 1863 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 COL4A5P29400 1685 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 MON2Q7Z3U7 1717 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 WI2-2373I1.2A0A1W2PRP0 233 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 GJE1A6NN92 205 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 SPECC1L-ADORA2AF8WAN1 911 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 H0YHG0 523 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 SIRPB1O00241 398 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 CASC3O15234 703 aaKnown RBP2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 EEDO75530 441 aaKnown RBP2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 INSP01308 110 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 IGLV2-23P01705 113 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 FGGP02679 453 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 IGHV4-34P06331 123 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 GKN3PP0CG01 181 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 DUX4L4P0CJ87 422 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 DNAH10OSP0CZ25 163 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 OR8G3PP0DMU2 310 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 CCNB1P14635 433 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 STOMP27105 288 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 CCR8P51685 355 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 C21orf59P57076 290 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 SELENBP1Q13228 472 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 PGGHGQ32M88 737 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 LRRC10Q5BKY1 277 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 FKBP1CQ5VVH2 108 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 SPECC1LQ69YQ0 1117 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 C22orf42Q6IC83 251 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 FRMPD2BQ6IN97 320 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 CLEC2AQ6UVW9 174 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 C6orf89Q6UWU4 347 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 LYPD2Q6UXB3 125 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 PEX26Q7Z412 305 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 THOC6Q86W42 341 aaKnown RBP2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 C11orf53Q8IXP5 236 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 DCAF4L2Q8NA75 395 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 OR1N2Q8NGR9 330 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 OR10R2Q8NGX6 335 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 RHEBL1Q8TAI7 183 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 SGK3Q96BR1 496 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 C8orf44Q96CB5 159 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 AURKBQ96GD4 344 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 ZBED3Q96IU2 234 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 RASL11BQ9BPW5 248 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 C11orf70Q9BRQ4 267 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 C20orf24Q9BUV8 137 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 HES7Q9BYE0 225 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 MTCH1Q9NZJ7 389 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 GCNT4Q9P109 453 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 GNPTGQ9UJJ9 305 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 PITPNC1Q9UKF7 332 aa2.09□□□□□ -2.07
HMGB1P27-201ENST00000431429 HTTP42858 3142 aa2.09□□□□□ -2.08
HMGB1P27-201ENST00000431429 AFDNP55196 1824 aaKnown RBP2.09□□□□□ -2.08
HMGB1P27-201ENST00000431429 UBN2Q6ZU65 1347 aa2.09□□□□□ -2.08
HMGB1P27-201ENST00000431429 ATRXP46100 2492 aa2.09□□□□□ -2.08
HMGB1P27-201ENST00000431429 CEMIPQ8WUJ3 1361 aa2.09□□□□□ -2.08
HMGB1P27-201ENST00000431429 ABCC12Q96J65 1359 aa2.09□□□□□ -2.08
HMGB1P27-201ENST00000431429 COL5A3P25940 1745 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 BCORQ6W2J9 1755 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 TRAV25A0A0B4J276 109 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 IGHV3-64DA0A0J9YX35 117 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 WRBO00258 174 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 CDC7O00311 574 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 EIF3HO15372 352 aaKnown RBP eCLIP2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 EIF4E2O60573 245 aaKnown RBP2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 TNFSF13O75888 250 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 ERLIN2O94905 339 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 UTS2O95399 124 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms