RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 VPS29Q9UBQ0 182 aa4.86□□□□□ -1.63
PTPN4-203ENST00000430976 CNTNAP1P78357 1384 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 CCL15-CCL14A0A0B4J2E2 113 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 A0A1W2PP18 115 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 A0A1W2PPC1 479 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 SSU72P8A0A1W2PR75 194 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 ANTXRLA6NF34 631 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 PHF1O43189 567 aaPredicted RBP4.85□□□□□ -1.63
PTPN4-203ENST00000430976 HCRTR1O43613 425 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 SFTPBP07988 381 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 SP9P0CG40 484 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 HOXC5Q00444 222 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 C1DQ13901 141 aaKnown RBP4.85□□□□□ -1.63
PTPN4-203ENST00000430976 GGTA1PQ4G0N0 100 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 FCRLAQ7L513 359 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 DND1Q8IYX4 353 aaKnown RBP4.85□□□□□ -1.63
PTPN4-203ENST00000430976 ZNF34Q8IZ26 560 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 LGI3Q8N145 548 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 PNPLA1Q8N8W4 532 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 LRRC57Q8N9N7 239 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 ZNF485Q8NCK3 441 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 TFAP2CQ92754 450 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 ARSGQ96EG1 525 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 WDR34Q96EX3 536 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 NSUN5Q96P11 429 aaKnown RBP4.85□□□□□ -1.63
PTPN4-203ENST00000430976 TAAR6Q96RI8 345 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 CHST8Q9H2A9 424 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 FBXL15Q9H469 300 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 FSCN3Q9NQT6 498 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 DOK5Q9P104 306 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 WDR45Q9Y484 360 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 FANCAO15360 1455 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 RALGAPBQ86X10 1494 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 USP42Q9H9J4 1324 aaKnown RBP4.85□□□□□ -1.63
PTPN4-203ENST00000430976 A0A1B0GUS0 222 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 J3QLI3 93 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 OR1F1O43749 312 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 FZD7O75084 574 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 TFP02787 698 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 ITGA5P08648 1049 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 ANOS1P23352 680 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 CPOXP36551 454 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 UCNP55089 124 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 BTG1P62324 171 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 MBLAC2Q68D91 279 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 FAHD1Q6P587 224 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 UNQ5815/PRO19632Q6UWF5 114 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 SLC30A8Q8IWU4 369 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 ACBD7Q8N6N7 88 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 C19orf47Q8N9M1 422 aaKnown RBP4.85□□□□□ -1.63
PTPN4-203ENST00000430976 B3GNT7Q8NFL0 401 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 OR56A4Q8NGH8 313 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 LNX1Q8TBB1 728 aaPredicted RBP4.85□□□□□ -1.63
PTPN4-203ENST00000430976 HAVCR2Q8TDQ0 301 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 ART4Q93070 314 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 ROPN1LQ96C74 230 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 KLRG1Q96E93 195 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 TNFRSF13CQ96RJ3 184 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 CLCC1Q96S66 551 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 LXNQ9BS40 222 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 VN1R1Q9GZP7 353 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 RBPJLQ9UBG7 517 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 PAM16Q9Y3D7 125 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 YIPF1Q9Y548 306 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 RFNGQ9Y644 331 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 MROH2AA6NES4 1674 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 OVOS2A0A0G2JMS6 1433 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 OVOS2A0A0J9YW53 1432 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 OVOS2Q6IE36 1432 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 FAM90A27PA6NNH2 459 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 K7EQS6 105 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 PIRO00625 290 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 LDB2O43679 373 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 MPC2O95563 127 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 BRS3P32247 399 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 SLC19A1P41440 591 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 ART1P52961 327 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 RAP2BP61225 183 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 RPS15AP62244 130 aaKnown RBP4.85□□□□□ -1.63
PTPN4-203ENST00000430976 EFNB1P98172 346 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 TCTN1Q2MV58 587 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 SYTL3Q4VX76 610 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 KHDC3LQ587J8 217 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 TMEM201Q5SNT2 666 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 STRADAQ7RTN6 431 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 DOLPP1Q86YN1 238 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 TMEM217Q8N7C4 229 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 TCTEX1D1Q8N7M0 179 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 SCCPDHQ8NBX0 429 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 OR4D5Q8NGN0 318 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 OR4S2Q8NH73 311 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 OR14L1PQ8NHC6 308 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 GUCD1Q96NT3 240 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 PITX2Q99697 317 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 RTP3Q9BQQ7 232 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 ZBTB26Q9HCK0 441 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 SLC23A2Q9UGH3 650 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 AMDHD2Q9Y303 409 aa4.85□□□□□ -1.63
PTPN4-203ENST00000430976 CD109Q6YHK3 1445 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 MYMKA6NI61 221 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms