RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 OR51S1Q8NGJ8 323 aa14.07□□□□□ -0.16
PTPRF-206ENST00000429895 OR2G3Q8NGZ4 309 aa14.07□□□□□ -0.16
PTPRF-206ENST00000429895 TVP23CQ96ET8 276 aa14.07□□□□□ -0.16
PTPRF-206ENST00000429895 QPCTLQ9NXS2 382 aa14.07□□□□□ -0.16
PTPRF-206ENST00000429895 DAPP1Q9UN19 280 aa14.07□□□□□ -0.16
PTPRF-206ENST00000429895 URGCP-MRPS24S4R325 110 aa14.07□□□□□ -0.16
PTPRF-206ENST00000429895 LOC107986453A0A1B0GWG9 222 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 LINC01565O15544 149 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 OR2J2O76002 312 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 OR5G3P0C626 314 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 CASP3P42574 277 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 SPACA5Q96QH8 159 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 KCNIP2Q9NS61 270 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 A0A1B0GVG6 124 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 PMS2P1A4D2B8 440 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 TXNDC12O95881 172 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 CRYAAP02489 173 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 CLDN15P56746 228 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 SPRED1Q7Z699 444 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 TEX37Q96LM6 180 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 PSD2Q9BQI7 771 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 SARGQ9BW04 601 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 TMEM9BQ9NQ34 198 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 KNDC1Q76NI1 1749 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 CXCL13O43927 109 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 FGF17O60258 216 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 SLC2A10O95528 541 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 CPEP16870 476 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 SOHLH1Q5JUK2 328 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 OR2AE1Q8NHA4 323 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 DOT1LQ8TEK3 1739 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 TNFRSF10CO14798 259 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 ARPC3O15145 178 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 OR10G3Q8NGC4 313 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 WSB2Q9NYS7 404 aaPredicted RBP14.06□□□□□ -0.16
PTPRF-206ENST00000429895 A0A1W2PR48 441 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 AQP7P3A6NL99 342 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 SOCS7O14512 581 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 ST6GAL1P15907 406 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 ARR3P36575 388 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 PPP2CBP62714 309 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 PPP2CAP67775 309 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 FCN2Q15485 313 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 TFAP2EQ6VUC0 442 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 UBE2FQ969M7 185 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 MBOAT4Q96T53 435 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 NARFLQ9H6Q4 476 aa14.06□□□□□ -0.16
PTPRF-206ENST00000429895 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.05□□□□□ -0.16
PTPRF-206ENST00000429895 LRP5LA4QPB2 252 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 RTL8BQ17RB0 113 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 CELF2-AS1Q8N7Q2 184 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 RNF141Q8WVD5 230 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 ITPKCQ96DU7 683 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 TMEM38AQ9H6F2 299 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 KCNG2Q9UJ96 466 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 HOXC11O43248 304 aaPredicted RBP14.05□□□□□ -0.16
PTPRF-206ENST00000429895 IHHQ14623 411 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 SARAFQ96BY9 339 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 SLC22A11Q9NSA0 550 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 FBXO4Q9UKT5 387 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 SH2D7A6NKC9 451 aaPredicted RBP14.05□□□□□ -0.16
PTPRF-206ENST00000429895 TMEM81Q6P7N7 255 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 PRSS35Q8N3Z0 413 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 PXT1Q8NFP0 134 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 MRPS24Q96EL2 167 aaKnown RBP14.05□□□□□ -0.16
PTPRF-206ENST00000429895 FYTTD1Q96QD9 318 aaKnown RBP14.05□□□□□ -0.16
PTPRF-206ENST00000429895 ZNF2Q9BSG1 426 aaPredicted RBP14.05□□□□□ -0.16
PTPRF-206ENST00000429895 IER2Q9BTL4 223 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 ZDHHC5Q9C0B5 715 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 ALOX5APP20292 161 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 INSM1Q01101 510 aaPredicted RBP14.05□□□□□ -0.16
PTPRF-206ENST00000429895 OR5M9Q8NGP3 310 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 YIPF5Q969M3 257 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 GPR78Q96P69 363 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 NIPSNAP3BQ9BS92 247 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 C1QTNF3Q9BXJ4 246 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 C11orf54Q9H0W9 315 aaPredicted RBP14.05□□□□□ -0.16
PTPRF-206ENST00000429895 MED9Q9NWA0 146 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 PPT2Q9UMR5 302 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 KRBOX1C9JBD0 128 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 WDR1O75083 606 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 MNX1P50219 401 aaPredicted RBP14.05□□□□□ -0.16
PTPRF-206ENST00000429895 SPANXN5Q5MJ07 72 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 PHYHD1Q5SRE7 291 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 FAM58AQ8N1B3 248 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 OR1M1Q8NGA1 313 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 OR10R2Q8NGX6 335 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 OR52N5Q8NH56 324 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 MAFAQ8NHW3 353 aaPredicted RBP14.05□□□□□ -0.16
PTPRF-206ENST00000429895 ROBO4Q8WZ75 1007 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 V9GYS6 101 aa14.05□□□□□ -0.16
PTPRF-206ENST00000429895 ECI1P42126 302 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 FABP6P51161 128 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 TMEM99Q8N816 258 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 HIST1H1CP16403 213 aaKnown RBP14.04□□□□□ -0.16
PTPRF-206ENST00000429895 ACHEP22303 614 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 SMAD4Q13485 552 aaKnown RBP14.04□□□□□ -0.16
PTPRF-206ENST00000429895 GFRALQ6UXV0 394 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 RHOUQ7L0Q8 258 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 VASH2Q86V25 355 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms