RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 MIEN1Q9BRT3 115 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 RNF126Q9BV68 326 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 NMES1Q9C002 83 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 WWTR1Q9GZV5 400 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 PCBD2Q9H0N5 130 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 NELFAQ9H3P2 528 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 TAF9BQ9HBM6 251 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 ANKRD10Q9NXR5 420 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 GSKIPQ9P0R6 139 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 DKKL1Q9UK85 242 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 OSGIN2Q9Y236 505 aa8.03□□□□□ -1.12
CDC42BPA-206ENST00000429440 CDHR4A6H8M9 788 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 MGAT4DA6NG13 374 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 KCNAB3O43448 404 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 ALOX12BO75342 701 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 FGF5P12034 268 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 TEAD1P28347 426 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 CHRNB4P30926 498 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 ACVR1BP36896 505 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 ACVRL1P37023 503 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 GABRA4P48169 554 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 SCAND1P57086 179 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 ERVFRD-1P60508 538 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 MC1RQ01726 317 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 SOHLH1Q5JUK2 328 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 STEAP1BQ6NZ63 245 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 TMEM220Q6QAJ8 160 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 CXCL17Q6UXB2 119 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 UNQ9370/PRO34162Q6UXP9 181 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 SLC25A26Q70HW3 274 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 ZSCAN4Q8NAM6 433 aaPredicted RBP8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 TMEM104Q8NE00 496 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 OR5L2Q8NGL0 311 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 OR1P1Q8NH06 330 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 OR2V1Q8NHB1 315 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 SMARCD2Q92925 531 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 C20orf144Q9BQM9 153 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 PBDC1Q9BVG4 233 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 FNDC11Q9BVV2 318 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 SLC2A8Q9NY64 477 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 VPS29Q9UBQ0 182 aa8.02□□□□□ -1.12
CDC42BPA-206ENST00000429440 A8MVM7 634 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 CCSO14618 274 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 DUSP11O75319 330 aaKnown RBP8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 TBX6O95947 436 aaPredicted RBP8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 TOMM40O96008 361 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 IFNA21P01568 189 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 IL2RAP01589 272 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 ALPPL2P10696 532 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 PTHLHP12272 177 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 TDGF1P13385 188 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 CX3CR1P49238 355 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 TNFSF10P50591 281 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 POLR2HP52434 150 aaKnown RBP8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 ARF6P62330 175 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 BTG2P78543 158 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 SLC10A7Q0GE19 358 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 MRPL49Q13405 166 aaKnown RBP8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 NFATC2Q13469 925 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 HYAL4Q2M3T9 481 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 ALG10BQ5I7T1 473 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 METRNLQ641Q3 311 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 Q6ZVU0 165 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 GRINAQ7Z429 371 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 LYG2Q86SG7 212 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 LINC01551Q86U37 167 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 PIANPQ8IYJ0 282 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 ZNF100Q8IYN0 542 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 CLEC1AQ8NC01 280 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 FBXO32Q969P5 355 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 GNRHR2Q96P88 292 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 EIF5A2Q9GZV4 153 aaKnown RBP8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 OR5V1Q9UGF6 321 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 GTF2A1LQ9UNN4 478 aa8.02□□□□□ -1.13
CDC42BPA-206ENST00000429440 MYO16Q9Y6X6 1858 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 MASP2O00187 686 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 SOCS6O14544 535 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 CNOT4O95628 575 aaKnown RBP8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 HPRT1P00492 218 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 HLA-AP01891 365 aaKnown RBP8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 DCNP07585 359 aaKnown RBP8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 SRMP19623 302 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 SLC2A5P22732 501 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 ZBTB25P24278 435 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 CAPZBP47756 277 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 GLIPR1P48060 266 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 CDC34P49427 236 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 FGF8P55075 233 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 HSF1Q00613 529 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 ACSM2AQ08AH3 577 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 PIN1Q13526 163 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 PRAMEF14Q5SWL7 426 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 ACSM2BQ68CK6 577 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 FBXW12Q6X9E4 464 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 MEX3BQ6ZN04 569 aaKnown RBP8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 MEPCEQ7L2J0 689 aaKnown RBP8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 LRRC70Q7Z2Q7 622 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 WDFY1Q8IWB7 410 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 TMEM99Q8N816 258 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 AMER3Q8N944 861 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms