RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 AKAIN1P0CW23 69 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 SULT1A3P0DMM9 295 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 SULT1A4P0DMN0 295 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 CT45A8P0DMV1 189 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 CT45A9P0DMV2 189 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 PNMTP11086 282 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 RPS2P15880 293 aaKnown RBP7.29□□□□□ -1.24
HPS4-205ENST00000429411 ACHEP22303 614 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 S100A11P31949 105 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 RBM34P42696 430 aaKnown RBP7.29□□□□□ -1.24
HPS4-205ENST00000429411 TNFRSF4P43489 277 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 RAP2BP61225 183 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 POU3F1Q03052 451 aaPredicted RBP7.29□□□□□ -1.24
HPS4-205ENST00000429411 DMWDQ09019 674 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 DYRK1AQ13627 763 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 ARFRP1Q13795 201 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 ACKR1Q16570 336 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 CT45A2Q5DJT8 189 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 WDR38Q5JTN6 314 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 EEF1A1P5Q5VTE0 462 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 STEAP1BQ6NZ63 245 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 TMEM205Q6UW68 189 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 ZNF546Q86UE3 836 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 C1orf210Q8IVY1 113 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 BPIFB2Q8N4F0 458 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 MARVELD3Q96A59 401 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 VSTM2LQ96N03 204 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 RBP7Q96R05 134 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 UBL7Q96S82 380 aaPredicted RBP7.29□□□□□ -1.24
HPS4-205ENST00000429411 GSKIPQ9P0R6 139 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 NTMQ9P121 344 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 PCDHGA9Q9Y5G4 932 aaKnown RBP7.29□□□□□ -1.24
HPS4-205ENST00000429411 ANKRD11Q6UB99 2663 aaPredicted RBP7.29□□□□□ -1.24
HPS4-205ENST00000429411 A0A1B0GW55 424 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 NAP1L6A6NFF2 107 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 ZNF736B4DX44 427 aaPredicted RBP7.28□□□□□ -1.24
HPS4-205ENST00000429411 TGFBR3LH3BV60 316 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 TRIM77I1YAP6 450 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 ACSM4P0C7M7 580 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 DUX4L2P0CJ85 424 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 DUX4L3P0CJ86 424 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 DUX4L4P0CJ87 422 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 DUX4L5P0CJ88 424 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 DUX4L6P0CJ89 424 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 DUX4L7P0CJ90 424 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 GABRG2P18507 467 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 ZP1P60852 638 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 FAM189A2Q15884 450 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 ZNF74Q16587 644 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 RNASE10Q5GAN6 216 aaKnown RBP7.28□□□□□ -1.24
HPS4-205ENST00000429411 FHL5Q5TD97 284 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 HACD4Q5VWC8 232 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 JMJD6Q6NYC1 403 aaPredicted RBP7.28□□□□□ -1.24
HPS4-205ENST00000429411 FAM199XQ6PEV8 388 aaPredicted RBP7.28□□□□□ -1.24
HPS4-205ENST00000429411 GSG1LQ6UXU4 331 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 UNQ6126/PRO20091Q6UXV3 157 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 PXKQ7Z7A4 578 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 PDZD9Q8IXQ8 264 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 OR5D18Q8NGL1 313 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 ASB12Q8WXK4 309 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 CMBLQ96DG6 245 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 JSRP1Q96MG2 331 aaPredicted RBP7.28□□□□□ -1.24
HPS4-205ENST00000429411 POTEKPQ9BYX7 375 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 TINAGL1Q9GZM7 467 aaPredicted RBP7.28□□□□□ -1.24
HPS4-205ENST00000429411 POFUT1Q9H488 388 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 MMP25Q9NPA2 562 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 MED29Q9NX70 200 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 KLRF1Q9NZS2 232 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 DUX4Q9UBX2 424 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 STEAP1Q9UHE8 339 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 ELF5Q9UKW6 265 aaPredicted RBP7.28□□□□□ -1.24
HPS4-205ENST00000429411 B9D1Q9UPM9 204 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 FASNP49327 2511 aaKnown RBP7.28□□□□□ -1.24
HPS4-205ENST00000429411 TMEM269A0A1B0GVZ9 245 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 CPED1A4D0V7 1026 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 KCNAB3O43448 404 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 SUSD5O60279 629 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 CNOT4O95628 575 aaKnown RBP7.28□□□□□ -1.24
HPS4-205ENST00000429411 IFNGR1P15260 489 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 ADRA2CP18825 462 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 GALP22466 123 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 MAP2K6P52564 334 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 FMODQ06828 376 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 STPG1Q5TH74 334 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 SHEQ5VZ18 495 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 COX15Q7KZN9 410 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 ZNF595Q8IYB9 648 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 MUC20Q8N307 709 aaPredicted RBP7.28□□□□□ -1.24
HPS4-205ENST00000429411 STEAP2Q8NFT2 490 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 OR13C9Q8NGT0 318 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 HAVCR1Q96D42 359 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 TM4SF19Q96DZ7 209 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 FAM71F1Q96KD3 344 aaPredicted RBP7.28□□□□□ -1.24
HPS4-205ENST00000429411 ZNF587Q96SQ5 575 aaPredicted RBP7.28□□□□□ -1.24
HPS4-205ENST00000429411 LMF2Q9BU23 707 aaKnown RBP7.28□□□□□ -1.24
HPS4-205ENST00000429411 PLEKHA1Q9HB21 404 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 SPACA1Q9HBV2 294 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 UPB1Q9UBR1 384 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 WNT16Q9UBV4 365 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 POMT2Q9UKY4 750 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms