RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 SLC6A1P30531 599 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 DCDP81605 110 aaKnown RBP7.49□□□□□ -1.21
CD44-208ENST00000428726 MYBPHQ13203 477 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 EXOSC2Q13868 293 aaKnown RBP7.49□□□□□ -1.21
CD44-208ENST00000428726 CBFBQ13951 182 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 ATXN7L3Q14CW9 347 aaPredicted RBP7.49□□□□□ -1.21
CD44-208ENST00000428726 IGFBP7Q16270 282 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 FAM69AQ5T7M9 428 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 BRICD5Q6PL45 260 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 FGD2Q7Z6J4 655 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 COMMD7Q86VX2 200 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 OR10K1Q8NGX5 313 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 COQ8AQ8NI60 647 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 FGGYQ96C11 551 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 OR51B6Q9H340 312 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 ELL3Q9HB65 397 aaPredicted RBP7.49□□□□□ -1.21
CD44-208ENST00000428726 ZFP64Q9NPA5 681 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 MRPL39Q9NYK5 338 aaKnown RBP7.49□□□□□ -1.21
CD44-208ENST00000428726 ABRACLQ9P1F3 81 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 ZNF69Q9UC07 566 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 HIF3AQ9Y2N7 669 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 ASH1LQ9NR48 2969 aaKnown RBP7.49□□□□□ -1.21
CD44-208ENST00000428726 TMEM269A0A1B0GVZ9 245 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 ADAM10O14672 748 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 GPRIN2O60269 458 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 BGLAPP02818 100 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 GLI4P10075 376 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 ALOX5APP20292 161 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 EPHA8P29322 1005 aaPredicted RBP7.49□□□□□ -1.21
CD44-208ENST00000428726 SLC6A9P48067 706 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 TSPAN5P62079 268 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 BTN1A1Q13410 526 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 CLPPQ16740 277 aaPredicted RBP7.49□□□□□ -1.21
CD44-208ENST00000428726 LGALSLQ3ZCW2 172 aaPredicted RBP7.49□□□□□ -1.21
CD44-208ENST00000428726 BEX5Q5H9J7 111 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 HACD4Q5VWC8 232 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 PYHIN1Q6K0P9 492 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 TMEM71Q6P5X7 295 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 TEX261Q6UWH6 196 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 MAMDC2Q7Z304 686 aaPredicted RBP7.49□□□□□ -1.21
CD44-208ENST00000428726 CARFQ8N187 725 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 TMEM156Q8N614 296 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 GVQW1Q8N7I0 195 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 LRRC75AQ8NAA5 344 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 OR13C9Q8NGT0 318 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 PHYHIPQ92561 330 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 LIN37Q96GY3 246 aaPredicted RBP7.49□□□□□ -1.21
CD44-208ENST00000428726 GON7Q9BXV9 100 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 BANF2Q9H503 90 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 RDH8Q9NYR8 311 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 GLTPQ9NZD2 209 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 ASH2LQ9UBL3 628 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 CDV3Q9UKY7 258 aaKnown RBP7.49□□□□□ -1.21
CD44-208ENST00000428726 LRP12Q9Y561 859 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 U3KQ87 197 aa7.49□□□□□ -1.21
CD44-208ENST00000428726 CEP192Q8TEP8 1941 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 LY6G6EA0A0G2JKS1 128 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 MS4A18H0YCH9 400 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 LAMTOR5O43504 91 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 DBHP09172 617 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 CCL3P10147 92 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 ZNF823P16415 610 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 PI3P19957 117 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 LCN1P31025 176 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 PTH2RP49190 550 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 POU3F4P49335 361 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 P2RX1P51575 399 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 SLC25A1P53007 311 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 DCAF7P61962 342 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 MS4A18Q3C1V0 323 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 OLFML2AQ68BL7 652 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 OR52W1Q6IF63 320 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 OVCH1Q7RTY7 1134 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 NUP54Q7Z3B4 507 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 TCTE3Q8IZS6 198 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 ZNF248Q8NDW4 579 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 EDAQ92838 391 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 SLC25A44Q96H78 314 aaPredicted RBP7.48□□□□□ -1.21
CD44-208ENST00000428726 SHDQ96IW2 340 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 SLC41A2Q96JW4 573 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 HES7Q9BYE0 225 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 ARRDC1-AS1Q9H2J1 176 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 ZCCHC4Q9H5U6 513 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 CA10Q9NS85 328 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 PISDQ9UG56 409 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 FBXO4Q9UKT5 387 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 MOKQ9UQ07 419 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 U3KQA8 63 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 TRAV36DV7A0A075B6V5 113 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 SLC22A23A1A5C7 686 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 TMEM235A6NFC5 223 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 SLC22A5O76082 557 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 SLC6A8P48029 635 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 SNU13P55769 128 aaKnown RBP7.48□□□□□ -1.21
CD44-208ENST00000428726 PER3P56645 1201 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 RPL27P61353 136 aaKnown RBP7.48□□□□□ -1.21
CD44-208ENST00000428726 PUDPQ08623 228 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 PCGF3Q3KNV8 242 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 LINC00303Q3SY05 128 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 ATP1A1-AS1Q5TC04 95 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms