RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 R4GMQ9 66 aa9.25□□□□□ -0.93
HDAC9-210ENST00000428307 UBL3O95164 117 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 WDPCPO95876 746 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 EIF3IQ13347 325 aaKnown RBP9.24□□□□□ -0.93
HDAC9-210ENST00000428307 UBE2NLQ5JXB2 153 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 RSBN1Q5VWQ0 802 aaPredicted RBP9.24□□□□□ -0.93
HDAC9-210ENST00000428307 ASPHD2Q6ICH7 369 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 ZNF544Q6NX49 715 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 CFAP77Q6ZQR2 320 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 UTS2BQ765I0 119 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 SUMF1Q8NBK3 374 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 PLPP7Q8NBV4 271 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 SYNPRQ8TBG9 265 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 TRIM63Q969Q1 353 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 SLC25A38Q96DW6 304 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 GPR87Q9BY21 358 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 C1orf198Q9H425 327 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 LHFPL6Q9Y693 200 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 OTOGLQ3ZCN5 2332 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 PINLYPA6NC86 204 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 NPIPA2E9PIF3 369 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 NPIPA3F8WFD2 350 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 RER1O15258 196 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 EIF1BO60739 113 aaKnown RBP9.24□□□□□ -0.93
HDAC9-210ENST00000428307 SRSF10O75494 262 aaKnown RBP9.24□□□□□ -0.93
HDAC9-210ENST00000428307 ITGA3P26006 1051 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 CD96P40200 585 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 RAB25P57735 213 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 PLA2G7Q13093 441 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 GPR176Q14439 515 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 WIPI1Q5MNZ9 446 aaPredicted RBP9.24□□□□□ -0.93
HDAC9-210ENST00000428307 SLC25A47Q6Q0C1 308 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 CREB3L2Q70SY1 520 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 OR10S1Q8NGN2 331 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 OR6N1Q8NGY5 312 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 SRXN1Q9BYN0 137 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 RNF121Q9H920 327 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 G6PC2Q9NQR9 355 aa9.24□□□□□ -0.93
HDAC9-210ENST00000428307 GDF2Q9UK05 429 aaPredicted RBP9.24□□□□□ -0.93
HDAC9-210ENST00000428307 LOC102725191A0A1B0GVB3 256 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 LRRC3CA6NJW4 275 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 C21orf140B9A014 251 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 P2RY10O00398 339 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 TLX3O43711 291 aaPredicted RBP9.23□□□□□ -0.93
HDAC9-210ENST00000428307 LMX1BO60663 402 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 CCNKO75909 580 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 PTHLHP12272 177 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 SRD5A2P31213 254 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 MMP15P51511 669 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 PRKXP51817 358 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 B3GALT5-AS1P59052 145 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 CSNK2A1P68400 391 aaPredicted RBP9.23□□□□□ -0.93
HDAC9-210ENST00000428307 PITPNAQ00169 270 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 SGCAQ16586 387 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 DCAF10Q5QP82 559 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 LINC00696Q6ZRV3 163 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 LINGO2Q7L985 606 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 IL22RA1Q8N6P7 574 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 OR51D1Q8NGF3 324 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 OR13C3Q8NGS6 347 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 OR2AJ1Q8NGZ0 328 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 UBASH3BQ8TF42 649 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 YIPF5Q969M3 257 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 SFXN2Q96NB2 322 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 HES7Q9BYE0 225 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 PARD6AQ9NPB6 346 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 TAS2R4Q9NYW5 299 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 PLA2G3Q9NZ20 509 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 HHLA2Q9UM44 414 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 CAMK2AQ9UQM7 478 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 PCSK5Q92824 1860 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 DMXL1Q9Y485 3027 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 A0A0B4J293 547 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 LOC107986453A0A1B0GWG9 222 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 A8MV72 311 aaPredicted RBP9.23□□□□□ -0.93
HDAC9-210ENST00000428307 CD2P06729 351 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 ITGA5P08648 1049 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 TMIGD3P0DMS9 266 aaPredicted RBP9.23□□□□□ -0.93
HDAC9-210ENST00000428307 SLC2A1P11166 492 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 ZNF17P17021 662 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 GDF1P27539 372 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 SELENOPP49908 381 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 AGFG1P52594 562 aaKnown RBP9.23□□□□□ -0.93
HDAC9-210ENST00000428307 ZNF239Q16600 458 aaKnown RBP9.23□□□□□ -0.93
HDAC9-210ENST00000428307 HIST3H3Q16695 136 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 SLC36A2Q495M3 483 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 PHYHD1Q5SRE7 291 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 BCL2L15Q5TBC7 163 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 ABHD17BQ5VST6 288 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 DEGS2Q6QHC5 323 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 KLHL24Q6TFL4 600 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 HDDC2Q7Z4H3 204 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 LUZP2Q86TE4 346 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 TOMM5Q8N4H5 51 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 DUSP18Q8NEJ0 188 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 OR9K2Q8NGE7 335 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 OR51A2Q8NGJ7 313 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 UPRTQ96BW1 309 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 S100A16Q96FQ6 103 aaKnown RBP9.23□□□□□ -0.93
HDAC9-210ENST00000428307 SIGLEC12Q96PQ1 595 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms