RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 FOXD3Q9UJU5 478 aaPredicted RBP23.57■■□□□ 1.36
SH3GL3-202ENST00000427482 GDF2Q9UK05 429 aaPredicted RBP23.57■■□□□ 1.36
SH3GL3-202ENST00000427482 GTF2A1LQ9UNN4 478 aa23.57■■□□□ 1.36
SH3GL3-202ENST00000427482 POLR1DQ9Y2S0 133 aa23.57■■□□□ 1.36
SH3GL3-202ENST00000427482 FLVCR1Q9Y5Y0 555 aa23.57■■□□□ 1.36
SH3GL3-202ENST00000427482 RIF1Q5UIP0 2472 aaKnown RBP23.57■■□□□ 1.36
SH3GL3-202ENST00000427482 ANKRD61A6NGH8 418 aa23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 KLRC4-KLRK1H3BQV0 150 aa23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 RAF1P04049 648 aa23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 SELENOPP49908 381 aa23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 LHX2P50458 406 aa23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 PDSS1Q5T2R2 415 aa23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 SLC22A16Q86VW1 577 aa23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 ROBO4Q8WZ75 1007 aa23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 HAS2Q92819 552 aa23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 CPNE4Q96A23 557 aaPredicted RBP23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 INTS12Q96CB8 462 aaKnown RBP23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 GFI1Q99684 422 aa23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 TIGARQ9NQ88 270 aa23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 CENPMQ9NSP4 180 aa23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 EMC9Q9Y3B6 208 aa23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 ARPC4-TTLL3A0A0A6YYG9 625 aa23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 CAMK2BQ13554 666 aa23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 RTP5Q14D33 572 aa23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 CFAP77Q6ZQR2 320 aa23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 FOXL2NBQ6ZUU3 175 aa23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 HIST2H2ABQ8IUE6 130 aaPredicted RBP23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 OR8H2Q8N162 312 aa23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 GDPD1Q8N9F7 314 aa23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 TRMT10AQ8TBZ6 339 aaKnown RBP23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 PPP1R14AQ96A00 147 aa23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 G6PC2Q9NQR9 355 aa23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 FAIMQ9NVQ4 179 aa23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 RCE1Q9Y256 329 aa23.56■■□□□ 1.36
SH3GL3-202ENST00000427482 ELK1P19419 428 aa23.55■■□□□ 1.36
SH3GL3-202ENST00000427482 PTBP1P26599 531 aaKnown RBP eCLIP23.55■■□□□ 1.362e-9■■■■■ 45.3
SH3GL3-202ENST00000427482 ARG2P78540 354 aa23.55■■□□□ 1.36
SH3GL3-202ENST00000427482 STAC2Q6ZMT1 411 aa23.55■■□□□ 1.36
SH3GL3-202ENST00000427482 LRRC28Q86X40 367 aaPredicted RBP23.55■■□□□ 1.36
SH3GL3-202ENST00000427482 C20orf196Q8IYI0 205 aa23.55■■□□□ 1.36
SH3GL3-202ENST00000427482 OR2AJ1Q8NGZ0 328 aa23.55■■□□□ 1.36
SH3GL3-202ENST00000427482 HTRA1Q92743 480 aa23.55■■□□□ 1.36
SH3GL3-202ENST00000427482 SCMH1Q96GD3 660 aa23.55■■□□□ 1.36
SH3GL3-202ENST00000427482 SLITRK2Q9H156 845 aa23.55■■□□□ 1.36
SH3GL3-202ENST00000427482 SLC6A15Q9H2J7 730 aa23.55■■□□□ 1.36
SH3GL3-202ENST00000427482 ABRACLQ9P1F3 81 aa23.55■■□□□ 1.36
SH3GL3-202ENST00000427482 POC5Q8NA72 575 aa23.54■■□□□ 1.36
SH3GL3-202ENST00000427482 TSEN15Q8WW01 171 aaKnown RBP23.54■■□□□ 1.36
SH3GL3-202ENST00000427482 TMEM106AQ96A25 262 aa23.54■■□□□ 1.36
SH3GL3-202ENST00000427482 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.54■■□□□ 1.36
SH3GL3-202ENST00000427482 TCF7L1Q9HCS4 588 aa23.54■■□□□ 1.36
SH3GL3-202ENST00000427482 OR52A1Q9UKL2 312 aa23.54■■□□□ 1.36
SH3GL3-202ENST00000427482 ZFHX2Q9C0A1 2572 aaPredicted RBP23.54■■□□□ 1.36
SH3GL3-202ENST00000427482 FAM25AB3EWG3 89 aa23.54■■□□□ 1.36
SH3GL3-202ENST00000427482 FAM25CB3EWG5 89 aa23.54■■□□□ 1.36
SH3GL3-202ENST00000427482 FAM25GB3EWG6 89 aa23.54■■□□□ 1.36
SH3GL3-202ENST00000427482 PAHP00439 452 aa23.54■■□□□ 1.36
SH3GL3-202ENST00000427482 DCTDP32321 178 aa23.54■■□□□ 1.36
SH3GL3-202ENST00000427482 CLDN18P56856 261 aa23.54■■□□□ 1.36
SH3GL3-202ENST00000427482 BAK1Q16611 211 aa23.54■■□□□ 1.36
SH3GL3-202ENST00000427482 SAMD12Q8N8I0 201 aa23.54■■□□□ 1.36
SH3GL3-202ENST00000427482 ZFP62Q8NB50 900 aaPredicted RBP23.54■■□□□ 1.36
SH3GL3-202ENST00000427482 ZNF845Q96IR2 970 aaPredicted RBP23.54■■□□□ 1.36
SH3GL3-202ENST00000427482 PPP1R3EQ9H7J1 279 aa23.54■■□□□ 1.36
SH3GL3-202ENST00000427482 NCOA6Q14686 2063 aaPredicted RBP23.53■■□□□ 1.36
SH3GL3-202ENST00000427482 TMEM269A0A1B0GVZ9 245 aa23.53■■□□□ 1.36
SH3GL3-202ENST00000427482 CYTIPO60759 359 aa23.53■■□□□ 1.36
SH3GL3-202ENST00000427482 MMP16P51512 607 aa23.53■■□□□ 1.36
SH3GL3-202ENST00000427482 LSM6P62312 80 aaKnown RBP23.53■■□□□ 1.36
SH3GL3-202ENST00000427482 RHOUQ7L0Q8 258 aa23.53■■□□□ 1.36
SH3GL3-202ENST00000427482 LRRTM1Q86UE6 522 aa23.53■■□□□ 1.36
SH3GL3-202ENST00000427482 CYSLTR2Q9NS75 346 aa23.53■■□□□ 1.36
SH3GL3-202ENST00000427482 ASH2LQ9UBL3 628 aa23.53■■□□□ 1.36
SH3GL3-202ENST00000427482 ZNF878C9JN71 531 aa23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 H3BSH0 61 aa23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 DHHO43323 396 aa23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 EIF4EP06730 217 aaKnown RBP23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 IL7P13232 177 aa23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 PPIAP62937 165 aaKnown RBP23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 CLN3Q13286 438 aa23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 RIN1Q13671 783 aa23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 PYDC2Q56P42 97 aa23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 ZNF766Q5HY98 468 aa23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 FCRLAQ7L513 359 aa23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 ZNF433Q8N7K0 673 aaPredicted RBP23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 ULBP2Q9BZM5 246 aa23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 NELFAQ9H3P2 528 aa23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 SP140LQ9H930 580 aa23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 MALT1Q9UDY8 824 aa23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 V9GY05 133 aa23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 ZNF708P17019 499 aa23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 NPR2P20594 1047 aa23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 MSR1P21757 451 aa23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 PSMD7P51665 324 aa23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 DEFA1P59665 94 aa23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 DEFA3P59666 94 aa23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 MADCAM1Q13477 382 aa23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 ZNF775Q96BV0 537 aaPredicted RBP23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 TBCCD1Q9NVR7 557 aa23.52■■□□□ 1.36
SH3GL3-202ENST00000427482 FAM206AQ9NX38 181 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms