RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 LINC00346Q8IVM7 164 aa12.77□□□□□ -0.37
CDK3-201ENST00000425876 IL17RDQ8NFM7 739 aa12.77□□□□□ -0.37
CDK3-201ENST00000425876 OR2AJ1Q8NGZ0 328 aa12.77□□□□□ -0.37
CDK3-201ENST00000425876 ABTB1Q969K4 478 aaPredicted RBP12.77□□□□□ -0.37
CDK3-201ENST00000425876 TMEM45BQ96B21 275 aa12.77□□□□□ -0.37
CDK3-201ENST00000425876 SLAMF6Q96DU3 332 aa12.77□□□□□ -0.37
CDK3-201ENST00000425876 SLC6A15Q9H2J7 730 aa12.77□□□□□ -0.37
CDK3-201ENST00000425876 NIPAL2Q9H841 368 aa12.77□□□□□ -0.37
CDK3-201ENST00000425876 GDF2Q9UK05 429 aaPredicted RBP12.77□□□□□ -0.37
CDK3-201ENST00000425876 ADAM30Q9UKF2 790 aa12.77□□□□□ -0.37
CDK3-201ENST00000425876 AKAP13Q12802 2813 aa12.76□□□□□ -0.37
CDK3-201ENST00000425876 ACACBO00763 2458 aa12.76□□□□□ -0.37
CDK3-201ENST00000425876 TRBV5-7A0A0A0MS05 114 aa12.76□□□□□ -0.37
CDK3-201ENST00000425876 A0A1B0GTH9 108 aa12.76□□□□□ -0.37
CDK3-201ENST00000425876 ISPDA4D126 451 aa12.76□□□□□ -0.37
CDK3-201ENST00000425876 PDCD5O14737 125 aa12.76□□□□□ -0.37
CDK3-201ENST00000425876 SLC43A1O75387 559 aa12.76□□□□□ -0.37
CDK3-201ENST00000425876 UPK1BO75841 260 aa12.76□□□□□ -0.37
CDK3-201ENST00000425876 WNT11O96014 354 aa12.76□□□□□ -0.37
CDK3-201ENST00000425876 PNPP00491 289 aa12.76□□□□□ -0.37
CDK3-201ENST00000425876 H2BFMP0C1H6 154 aa12.76□□□□□ -0.37
CDK3-201ENST00000425876 SRMP19623 302 aa12.76□□□□□ -0.37
CDK3-201ENST00000425876 MSR1P21757 451 aa12.76□□□□□ -0.37
CDK3-201ENST00000425876 APEX1P27695 318 aaKnown RBP12.76□□□□□ -0.37
CDK3-201ENST00000425876 SELENOPP49908 381 aa12.76□□□□□ -0.37
CDK3-201ENST00000425876 CEP78Q5JTW2 689 aa12.76□□□□□ -0.37
CDK3-201ENST00000425876 METAP1DQ6UB28 335 aaPredicted RBP12.76□□□□□ -0.37
CDK3-201ENST00000425876 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.76□□□□□ -0.37
CDK3-201ENST00000425876 ROBO4Q8WZ75 1007 aa12.76□□□□□ -0.37
CDK3-201ENST00000425876 SH3GL3Q99963 347 aa12.76□□□□□ -0.37
CDK3-201ENST00000425876 CCDC32Q9BV29 185 aa12.76□□□□□ -0.37
CDK3-201ENST00000425876 NELFAQ9H3P2 528 aa12.76□□□□□ -0.37
CDK3-201ENST00000425876 ZDHHC11Q9H8X9 412 aa12.76□□□□□ -0.37
CDK3-201ENST00000425876 COMMD3Q9UBI1 195 aa12.76□□□□□ -0.37
CDK3-201ENST00000425876 POLR1DQ9Y2S0 133 aa12.76□□□□□ -0.37
CDK3-201ENST00000425876 V9GYH0 126 aa12.76□□□□□ -0.37
CDK3-201ENST00000425876 TPRP12270 2363 aaKnown RBP12.76□□□□□ -0.37
CDK3-201ENST00000425876 ZNF878C9JN71 531 aa12.75□□□□□ -0.37
CDK3-201ENST00000425876 SLC19A2O60779 497 aa12.75□□□□□ -0.37
CDK3-201ENST00000425876 ISG15P05161 165 aa12.75□□□□□ -0.37
CDK3-201ENST00000425876 OCM2P0CE71 109 aa12.75□□□□□ -0.37
CDK3-201ENST00000425876 PTBP1P26599 531 aaKnown RBP eCLIP12.75□□□□□ -0.37
CDK3-201ENST00000425876 CDAP32320 146 aa12.75□□□□□ -0.37
CDK3-201ENST00000425876 THBS2P35442 1172 aa12.75□□□□□ -0.37
CDK3-201ENST00000425876 ZNF84P51523 738 aa12.75□□□□□ -0.37
CDK3-201ENST00000425876 IFITM3Q01628 133 aa12.75□□□□□ -0.37
CDK3-201ENST00000425876 RGS21Q2M5E4 152 aa12.75□□□□□ -0.37
CDK3-201ENST00000425876 DEFB109BQ30KR1 87 aa12.75□□□□□ -0.37
CDK3-201ENST00000425876 PHYHD1Q5SRE7 291 aa12.75□□□□□ -0.37
CDK3-201ENST00000425876 RIPPLY2Q5TAB7 128 aa12.75□□□□□ -0.37
CDK3-201ENST00000425876 CORO6Q6QEF8 472 aa12.75□□□□□ -0.37
CDK3-201ENST00000425876 ZNF704Q6ZNC4 412 aaPredicted RBP12.75□□□□□ -0.37
CDK3-201ENST00000425876 SPATC1Q76KD6 591 aa12.75□□□□□ -0.37
CDK3-201ENST00000425876 AAED1Q7RTV5 226 aa12.75□□□□□ -0.37
CDK3-201ENST00000425876 OR10S1Q8NGN2 331 aa12.75□□□□□ -0.37
CDK3-201ENST00000425876 CHPT1Q8WUD6 406 aa12.75□□□□□ -0.37
CDK3-201ENST00000425876 ULBP2Q9BZM5 246 aa12.75□□□□□ -0.37
CDK3-201ENST00000425876 SLITRK2Q9H156 845 aa12.75□□□□□ -0.37
CDK3-201ENST00000425876 OCEL1Q9H607 264 aa12.75□□□□□ -0.37
CDK3-201ENST00000425876 RNF122Q9H9V4 155 aa12.75□□□□□ -0.37
CDK3-201ENST00000425876 EMC7Q9NPA0 242 aa12.75□□□□□ -0.37
CDK3-201ENST00000425876 KCNMB2Q9Y691 235 aa12.75□□□□□ -0.37
CDK3-201ENST00000425876 EPG5Q9HCE0 2579 aa12.75□□□□□ -0.37
CDK3-201ENST00000425876 A0A087WV48 116 aa12.74□□□□□ -0.37
CDK3-201ENST00000425876 TRAV17A0A0B4J275 112 aa12.74□□□□□ -0.37
CDK3-201ENST00000425876 A0A1W2PPK0 400 aa12.74□□□□□ -0.37
CDK3-201ENST00000425876 ACOD1A6NK06 481 aa12.74□□□□□ -0.37
CDK3-201ENST00000425876 SYNGR4O95473 234 aa12.74□□□□□ -0.37
CDK3-201ENST00000425876 EPXP11678 715 aa12.74□□□□□ -0.37
CDK3-201ENST00000425876 OR10A3P58181 314 aa12.74□□□□□ -0.37
CDK3-201ENST00000425876 MRPS34P82930 218 aaKnown RBP12.74□□□□□ -0.37
CDK3-201ENST00000425876 MFGE8Q08431 387 aaPredicted RBP12.74□□□□□ -0.37
CDK3-201ENST00000425876 IDNKQ5T6J7 187 aa12.74□□□□□ -0.37
CDK3-201ENST00000425876 CPT1CQ8TCG5 803 aa12.74□□□□□ -0.37
CDK3-201ENST00000425876 NABP1Q96AH0 204 aa12.74□□□□□ -0.37
CDK3-201ENST00000425876 DIRAS2Q96HU8 199 aa12.74□□□□□ -0.37
CDK3-201ENST00000425876 ZNF845Q96IR2 970 aaPredicted RBP12.74□□□□□ -0.37
CDK3-201ENST00000425876 SMAD5Q99717 465 aaKnown RBP12.74□□□□□ -0.37
CDK3-201ENST00000425876 SOSTQ9BQB4 213 aa12.74□□□□□ -0.37
CDK3-201ENST00000425876 B3GAT2Q9NPZ5 323 aa12.74□□□□□ -0.37
CDK3-201ENST00000425876 G6PC2Q9NQR9 355 aa12.74□□□□□ -0.37
CDK3-201ENST00000425876 CENPMQ9NSP4 180 aa12.74□□□□□ -0.37
CDK3-201ENST00000425876 ABRACLQ9P1F3 81 aa12.74□□□□□ -0.37
CDK3-201ENST00000425876 OR52A1Q9UKL2 312 aa12.74□□□□□ -0.37
CDK3-201ENST00000425876 MCTS1Q9ULC4 181 aaKnown RBP12.74□□□□□ -0.37
CDK3-201ENST00000425876 SLC22A13Q9Y226 551 aa12.74□□□□□ -0.37
CDK3-201ENST00000425876 TMEM269A0A1B0GVZ9 245 aa12.73□□□□□ -0.37
CDK3-201ENST00000425876 CPN1P15169 458 aa12.73□□□□□ -0.37
CDK3-201ENST00000425876 NPR2P20594 1047 aa12.73□□□□□ -0.37
CDK3-201ENST00000425876 ACHEP22303 614 aa12.73□□□□□ -0.37
CDK3-201ENST00000425876 NTF4P34130 210 aa12.73□□□□□ -0.37
CDK3-201ENST00000425876 EVX1P49640 407 aa12.73□□□□□ -0.37
CDK3-201ENST00000425876 PSMD7P51665 324 aa12.73□□□□□ -0.37
CDK3-201ENST00000425876 HIST1H3AP68431 136 aa12.73□□□□□ -0.37
CDK3-201ENST00000425876 HIST2H3PS2Q5TEC6 136 aa12.73□□□□□ -0.37
CDK3-201ENST00000425876 TMEM244Q5VVB8 128 aa12.73□□□□□ -0.37
CDK3-201ENST00000425876 XKRXQ6PP77 449 aa12.73□□□□□ -0.37
CDK3-201ENST00000425876 KLHL24Q6TFL4 600 aa12.73□□□□□ -0.37
CDK3-201ENST00000425876 CFAP77Q6ZQR2 320 aa12.73□□□□□ -0.37
CDK3-201ENST00000425876 HIST2H3AQ71DI3 136 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms