RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 APEX1P27695 318 aaKnown RBP23.48■■□□□ 1.35
LDB1-202ENST00000425280 MEOX1P50221 254 aa23.48■■□□□ 1.35
LDB1-202ENST00000425280 PSMD7P51665 324 aa23.48■■□□□ 1.35
LDB1-202ENST00000425280 ZNF133P52736 654 aaPredicted RBP23.48■■□□□ 1.35
LDB1-202ENST00000425280 BAK1Q16611 211 aa23.48■■□□□ 1.35
LDB1-202ENST00000425280 C10orf128Q5T292 105 aa23.48■■□□□ 1.35
LDB1-202ENST00000425280 TRMT10AQ8TBZ6 339 aaKnown RBP23.48■■□□□ 1.35
LDB1-202ENST00000425280 GDF2Q9UK05 429 aaPredicted RBP23.48■■□□□ 1.35
LDB1-202ENST00000425280 POLR1DQ9Y2S0 133 aa23.48■■□□□ 1.35
LDB1-202ENST00000425280 RIF1Q5UIP0 2472 aaKnown RBP23.48■■□□□ 1.35
LDB1-202ENST00000425280 ZNF716A6NP11 495 aa23.48■■□□□ 1.35
LDB1-202ENST00000425280 GLSO94925 669 aaPredicted RBP23.48■■□□□ 1.35
LDB1-202ENST00000425280 PLGLB1Q02325 96 aa23.48■■□□□ 1.35
LDB1-202ENST00000425280 ABLIM2Q6H8Q1 611 aa23.48■■□□□ 1.35
LDB1-202ENST00000425280 METAP1DQ6UB28 335 aaPredicted RBP23.48■■□□□ 1.35
LDB1-202ENST00000425280 CFAP77Q6ZQR2 320 aa23.48■■□□□ 1.35
LDB1-202ENST00000425280 POC5Q8NA72 575 aa23.48■■□□□ 1.35
LDB1-202ENST00000425280 ZNF552Q9H707 407 aaPredicted RBP23.48■■□□□ 1.35
LDB1-202ENST00000425280 MALT1Q9UDY8 824 aa23.48■■□□□ 1.35
LDB1-202ENST00000425280 FOXD3Q9UJU5 478 aaPredicted RBP23.48■■□□□ 1.35
LDB1-202ENST00000425280 FLVCR1Q9Y5Y0 555 aa23.48■■□□□ 1.35
LDB1-202ENST00000425280 FAM25AB3EWG3 89 aa23.47■■□□□ 1.35
LDB1-202ENST00000425280 FAM25CB3EWG5 89 aa23.47■■□□□ 1.35
LDB1-202ENST00000425280 FAM25GB3EWG6 89 aa23.47■■□□□ 1.35
LDB1-202ENST00000425280 ASCL5Q7RTU5 278 aa23.47■■□□□ 1.35
LDB1-202ENST00000425280 HIST2H2ABQ8IUE6 130 aaPredicted RBP23.47■■□□□ 1.35
LDB1-202ENST00000425280 SAMD12Q8N8I0 201 aa23.47■■□□□ 1.35
LDB1-202ENST00000425280 GDPD1Q8N9F7 314 aa23.47■■□□□ 1.35
LDB1-202ENST00000425280 TMEM106AQ96A25 262 aa23.47■■□□□ 1.35
LDB1-202ENST00000425280 ZNF775Q96BV0 537 aaPredicted RBP23.47■■□□□ 1.35
LDB1-202ENST00000425280 PPP1R3EQ9H7J1 279 aa23.47■■□□□ 1.35
LDB1-202ENST00000425280 G6PC2Q9NQR9 355 aa23.47■■□□□ 1.35
LDB1-202ENST00000425280 ANKRD61A6NGH8 418 aa23.47■■□□□ 1.35
LDB1-202ENST00000425280 RAF1P04049 648 aa23.47■■□□□ 1.35
LDB1-202ENST00000425280 CD46P15529 392 aa23.47■■□□□ 1.35
LDB1-202ENST00000425280 LHX2P50458 406 aa23.47■■□□□ 1.35
LDB1-202ENST00000425280 PYDC2Q56P42 97 aa23.47■■□□□ 1.35
LDB1-202ENST00000425280 STAC2Q6ZMT1 411 aa23.47■■□□□ 1.35
LDB1-202ENST00000425280 OR2AJ1Q8NGZ0 328 aa23.47■■□□□ 1.35
LDB1-202ENST00000425280 ABTB1Q969K4 478 aaPredicted RBP23.47■■□□□ 1.35
LDB1-202ENST00000425280 ZNF845Q96IR2 970 aaPredicted RBP23.47■■□□□ 1.35
LDB1-202ENST00000425280 SLC6A15Q9H2J7 730 aa23.47■■□□□ 1.35
LDB1-202ENST00000425280 TCF7L1Q9HCS4 588 aa23.47■■□□□ 1.35
LDB1-202ENST00000425280 PHF3Q92576 2039 aaKnown RBP23.46■■□□□ 1.35
LDB1-202ENST00000425280 A0A0B4J203 849 aa23.46■■□□□ 1.35
LDB1-202ENST00000425280 KLRC4-KLRK1H3BQV0 150 aa23.46■■□□□ 1.35
LDB1-202ENST00000425280 EIF4EP06730 217 aaKnown RBP23.46■■□□□ 1.35
LDB1-202ENST00000425280 LRRC28Q86X40 367 aaPredicted RBP23.46■■□□□ 1.35
LDB1-202ENST00000425280 C20orf196Q8IYI0 205 aa23.46■■□□□ 1.35
LDB1-202ENST00000425280 ZNF433Q8N7K0 673 aaPredicted RBP23.46■■□□□ 1.35
LDB1-202ENST00000425280 TSEN15Q8WW01 171 aaKnown RBP23.46■■□□□ 1.35
LDB1-202ENST00000425280 HAS2Q92819 552 aa23.46■■□□□ 1.35
LDB1-202ENST00000425280 CPNE4Q96A23 557 aaPredicted RBP23.46■■□□□ 1.35
LDB1-202ENST00000425280 PNPLA2Q96AD5 504 aa23.46■■□□□ 1.35
LDB1-202ENST00000425280 INTS12Q96CB8 462 aaKnown RBP23.46■■□□□ 1.35
LDB1-202ENST00000425280 OR52A1Q9UKL2 312 aa23.46■■□□□ 1.35
LDB1-202ENST00000425280 TMEM269A0A1B0GVZ9 245 aa23.45■■□□□ 1.35
LDB1-202ENST00000425280 IL7P13232 177 aa23.45■■□□□ 1.35
LDB1-202ENST00000425280 SNRPBP14678 240 aaKnown RBP23.45■■□□□ 1.35
LDB1-202ENST00000425280 P2RY14Q15391 338 aa23.45■■□□□ 1.35
LDB1-202ENST00000425280 PDSS1Q5T2R2 415 aa23.45■■□□□ 1.35
LDB1-202ENST00000425280 LRRTM1Q86UE6 522 aa23.45■■□□□ 1.35
LDB1-202ENST00000425280 OR5H6Q8NGV6 325 aa23.45■■□□□ 1.35
LDB1-202ENST00000425280 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.45■■□□□ 1.352e-6■■■□□ 16.6
LDB1-202ENST00000425280 SLITRK2Q9H156 845 aa23.45■■□□□ 1.35
LDB1-202ENST00000425280 CYSLTR2Q9NS75 346 aa23.45■■□□□ 1.35
LDB1-202ENST00000425280 ABRACLQ9P1F3 81 aa23.45■■□□□ 1.35
LDB1-202ENST00000425280 ASH2LQ9UBL3 628 aa23.45■■□□□ 1.35
LDB1-202ENST00000425280 TRAV8-7A0A075B6U6 113 aa23.45■■□□□ 1.34
LDB1-202ENST00000425280 PTBP1P26599 531 aaKnown RBP eCLIP23.45■■□□□ 1.34
LDB1-202ENST00000425280 NTF4P34130 210 aa23.45■■□□□ 1.34
LDB1-202ENST00000425280 ARG2P78540 354 aa23.45■■□□□ 1.34
LDB1-202ENST00000425280 CAMK2BQ13554 666 aa23.45■■□□□ 1.34
LDB1-202ENST00000425280 HYAL4Q2M3T9 481 aa23.45■■□□□ 1.34
LDB1-202ENST00000425280 FOXL2NBQ6ZUU3 175 aa23.45■■□□□ 1.34
LDB1-202ENST00000425280 ADRA2CP18825 462 aa23.44■■□□□ 1.34
LDB1-202ENST00000425280 NPR2P20594 1047 aa23.44■■□□□ 1.34
LDB1-202ENST00000425280 CLDN18P56856 261 aa23.44■■□□□ 1.34
LDB1-202ENST00000425280 IL18Q14116 193 aa23.44■■□□□ 1.34
LDB1-202ENST00000425280 SGCAQ16586 387 aa23.44■■□□□ 1.34
LDB1-202ENST00000425280 THRSPQ92748 146 aa23.44■■□□□ 1.34
LDB1-202ENST00000425280 EXTL2Q9UBQ6 330 aa23.44■■□□□ 1.34
LDB1-202ENST00000425280 RCE1Q9Y256 329 aa23.44■■□□□ 1.34
LDB1-202ENST00000425280 V9GY05 133 aa23.44■■□□□ 1.34
LDB1-202ENST00000425280 IFITM5A6NNB3 132 aa23.44■■□□□ 1.34
LDB1-202ENST00000425280 PROB1E7EW31 1015 aa23.44■■□□□ 1.34
LDB1-202ENST00000425280 DHHO43323 396 aa23.44■■□□□ 1.34
LDB1-202ENST00000425280 CSF3P09919 207 aa23.44■■□□□ 1.34
LDB1-202ENST00000425280 DCTDP32321 178 aa23.44■■□□□ 1.34
LDB1-202ENST00000425280 MMP16P51512 607 aa23.44■■□□□ 1.34
LDB1-202ENST00000425280 DEFA1P59665 94 aa23.44■■□□□ 1.34
LDB1-202ENST00000425280 DEFA3P59666 94 aa23.44■■□□□ 1.34
LDB1-202ENST00000425280 SCMH1Q96GD3 660 aa23.44■■□□□ 1.34
LDB1-202ENST00000425280 SP140LQ9H930 580 aa23.44■■□□□ 1.34
LDB1-202ENST00000425280 BRD7Q9NPI1 651 aa23.44■■□□□ 1.34
LDB1-202ENST00000425280 FAM206AQ9NX38 181 aa23.44■■□□□ 1.34
LDB1-202ENST00000425280 TBC1D24Q9ULP9 559 aa23.44■■□□□ 1.34
LDB1-202ENST00000425280 CYTIPO60759 359 aa23.43■■□□□ 1.34
LDB1-202ENST00000425280 CCL11P51671 97 aa23.43■■□□□ 1.34
LDB1-202ENST00000425280 LSM6P62312 80 aaKnown RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms