RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 ASH2LQ9UBL3 628 aa13.96□□□□□ -0.17
CHCHD3-202ENST00000423635 KPNA4O00629 521 aaPredicted RBP13.95□□□□□ -0.18
CHCHD3-202ENST00000423635 TNFRSF13BO14836 293 aaPredicted RBP13.95□□□□□ -0.18
CHCHD3-202ENST00000423635 TSPAN15O95858 294 aa13.95□□□□□ -0.18
CHCHD3-202ENST00000423635 TSPAN19P0C672 248 aa13.95□□□□□ -0.18
CHCHD3-202ENST00000423635 KITP10721 976 aa13.95□□□□□ -0.18
CHCHD3-202ENST00000423635 THRBP10828 461 aa13.95□□□□□ -0.18
CHCHD3-202ENST00000423635 GSTM3P21266 225 aa13.95□□□□□ -0.18
CHCHD3-202ENST00000423635 AQP1P29972 269 aa13.95□□□□□ -0.18
CHCHD3-202ENST00000423635 MMP16P51512 607 aa13.95□□□□□ -0.18
CHCHD3-202ENST00000423635 GPR157Q5UAW9 335 aa13.95□□□□□ -0.18
CHCHD3-202ENST00000423635 NPEPL1Q8NDH3 523 aa13.95□□□□□ -0.18
CHCHD3-202ENST00000423635 HDAC2Q92769 488 aaKnown RBP13.95□□□□□ -0.18
CHCHD3-202ENST00000423635 HAVCR1Q96D42 359 aa13.95□□□□□ -0.18
CHCHD3-202ENST00000423635 NEIL1Q96FI4 390 aaPredicted RBP13.95□□□□□ -0.18
CHCHD3-202ENST00000423635 MAGEB18Q96M61 343 aa13.95□□□□□ -0.18
CHCHD3-202ENST00000423635 OR2V2Q96R30 315 aa13.95□□□□□ -0.18
CHCHD3-202ENST00000423635 NUDT16L1Q9BRJ7 211 aaKnown RBP13.95□□□□□ -0.18
CHCHD3-202ENST00000423635 INIPQ9NRY2 104 aa13.95□□□□□ -0.18
CHCHD3-202ENST00000423635 VAPAQ9P0L0 249 aa13.95□□□□□ -0.18
CHCHD3-202ENST00000423635 SLC7A7Q9UM01 511 aa13.95□□□□□ -0.18
CHCHD3-202ENST00000423635 TRBV5-3A0A0A0MS03 114 aa13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 TRAPPC13A5PLN9 417 aa13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 GMNCA6NCL1 334 aa13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 NPIPB13A6NJU9 1138 aa13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 NPIPB4C9JG80 1138 aa13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 FUT1P19526 365 aa13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 LAP3P28838 519 aa13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 MRPL19P49406 292 aaKnown RBP13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 PCBP3P57721 371 aaKnown RBP13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 FGF12P61328 243 aa13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 PCBD1P61457 104 aa13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 SYT9Q86SS6 491 aa13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 TSPYL5Q86VY4 417 aaPredicted RBP13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 GPR32P1Q8NGA4 272 aa13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 OR4D11Q8NGI4 311 aa13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 SSMEM1Q8WWF3 244 aa13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 NSMAFQ92636 917 aa13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 CMBLQ96DG6 245 aa13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 OR52B2Q96RD2 323 aa13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 PRSS27Q9BQR3 290 aa13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 TMEM246Q9BRR3 403 aa13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 PCDHAC1Q9H158 963 aa13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 POFUT1Q9H488 388 aa13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 IKZF5Q9H5V7 419 aa13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 TCF7L1Q9HCS4 588 aa13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 NDRG4Q9ULP0 352 aaKnown RBP13.94□□□□□ -0.18
CHCHD3-202ENST00000423635 C5orf63A6NC05 138 aa13.93□□□□□ -0.18
CHCHD3-202ENST00000423635 RGS16O15492 202 aaPredicted RBP13.93□□□□□ -0.18
CHCHD3-202ENST00000423635 ABHD16AO95870 558 aa13.93□□□□□ -0.18
CHCHD3-202ENST00000423635 COX5BP10606 129 aa13.93□□□□□ -0.18
CHCHD3-202ENST00000423635 NR2C1P13056 603 aa13.93□□□□□ -0.18
CHCHD3-202ENST00000423635 AQP2P41181 271 aa13.93□□□□□ -0.18
CHCHD3-202ENST00000423635 FMODQ06828 376 aa13.93□□□□□ -0.18
CHCHD3-202ENST00000423635 BEAN1Q3B7T3 259 aa13.93□□□□□ -0.18
CHCHD3-202ENST00000423635 ZNF404Q494X3 552 aa13.93□□□□□ -0.18
CHCHD3-202ENST00000423635 TTMPQ5BVD1 217 aa13.93□□□□□ -0.18
CHCHD3-202ENST00000423635 FOXL2NBQ6ZUU3 175 aa13.93□□□□□ -0.18
CHCHD3-202ENST00000423635 MAVSQ7Z434 540 aa13.93□□□□□ -0.18
CHCHD3-202ENST00000423635 RBM45Q8IUH3 476 aaKnown RBP13.93□□□□□ -0.18
CHCHD3-202ENST00000423635 FAM110DQ8TAY7 271 aaPredicted RBP13.93□□□□□ -0.18
CHCHD3-202ENST00000423635 TBC1D15Q8TC07 691 aa13.93□□□□□ -0.18
CHCHD3-202ENST00000423635 LIPHQ8WWY8 451 aa13.93□□□□□ -0.18
CHCHD3-202ENST00000423635 PTP4A1Q93096 173 aa13.93□□□□□ -0.18
CHCHD3-202ENST00000423635 WACQ9BTA9 647 aa13.93□□□□□ -0.18
CHCHD3-202ENST00000423635 CORO2BQ9UQ03 480 aa13.93□□□□□ -0.18
CHCHD3-202ENST00000423635 M0QX08 132 aa13.92□□□□□ -0.18
CHCHD3-202ENST00000423635 ZNF205O95201 554 aa13.92□□□□□ -0.18
CHCHD3-202ENST00000423635 IGF2P01344 180 aa13.92□□□□□ -0.18
CHCHD3-202ENST00000423635 MT-ND1P03886 318 aa13.92□□□□□ -0.18
CHCHD3-202ENST00000423635 ZNF181Q2M3W8 571 aa13.92□□□□□ -0.18
CHCHD3-202ENST00000423635 KRT71Q3SY84 523 aa13.92□□□□□ -0.18
CHCHD3-202ENST00000423635 TNFAIP8L3Q5GJ75 292 aa13.92□□□□□ -0.18
CHCHD3-202ENST00000423635 PAGE3Q5JUK9 113 aa13.92□□□□□ -0.18
CHCHD3-202ENST00000423635 KPRPQ5T749 579 aaPredicted RBP13.92□□□□□ -0.18
CHCHD3-202ENST00000423635 RUSC1-AS1Q66K80 236 aa13.92□□□□□ -0.18
CHCHD3-202ENST00000423635 Q6ZPA2 131 aa13.92□□□□□ -0.18
CHCHD3-202ENST00000423635 NLRC3Q7RTR2 1065 aa13.92□□□□□ -0.18
CHCHD3-202ENST00000423635 FUNDC1Q8IVP5 155 aa13.92□□□□□ -0.18
CHCHD3-202ENST00000423635 OR8B3Q8NGG8 313 aa13.92□□□□□ -0.18
CHCHD3-202ENST00000423635 ZNF420Q8TAQ5 688 aaPredicted RBP13.92□□□□□ -0.18
CHCHD3-202ENST00000423635 FNDC8Q8TC99 324 aa13.92□□□□□ -0.18
CHCHD3-202ENST00000423635 OR8B2Q96RD0 313 aa13.92□□□□□ -0.18
CHCHD3-202ENST00000423635 PAIP2Q9BPZ3 127 aaKnown RBP13.92□□□□□ -0.18
CHCHD3-202ENST00000423635 TXNIPQ9H3M7 391 aa13.92□□□□□ -0.18
CHCHD3-202ENST00000423635 KCNK9Q9NPC2 374 aa13.92□□□□□ -0.18
CHCHD3-202ENST00000423635 ANGPT4Q9Y264 503 aa13.92□□□□□ -0.18
CHCHD3-202ENST00000423635 OR7A10O76100 309 aa13.91□□□□□ -0.18
CHCHD3-202ENST00000423635 CYB5R3P00387 301 aaPredicted RBP13.91□□□□□ -0.18
CHCHD3-202ENST00000423635 PITPNBP48739 271 aa13.91□□□□□ -0.18
CHCHD3-202ENST00000423635 CD47Q08722 323 aa13.91□□□□□ -0.18
CHCHD3-202ENST00000423635 ENDOGQ14249 297 aaKnown RBP13.91□□□□□ -0.18
CHCHD3-202ENST00000423635 C2orf68Q2NKX9 166 aa13.91□□□□□ -0.18
CHCHD3-202ENST00000423635 WDR25Q64LD2 544 aaPredicted RBP13.91□□□□□ -0.18
CHCHD3-202ENST00000423635 BLOC1S3Q6QNY0 202 aa13.91□□□□□ -0.18
CHCHD3-202ENST00000423635 ZNF841Q6ZN19 808 aa13.91□□□□□ -0.18
CHCHD3-202ENST00000423635 PTOV1Q86YD1 416 aa13.91□□□□□ -0.18
CHCHD3-202ENST00000423635 ZSCAN4Q8NAM6 433 aaPredicted RBP13.91□□□□□ -0.18
CHCHD3-202ENST00000423635 MOSPD2Q8NHP6 518 aa13.91□□□□□ -0.18
CHCHD3-202ENST00000423635 AENQ8WTP8 325 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms