RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 B2MP61769 119 aa3.17□□□□□ -1.9
TOP2A-201ENST00000423485 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.17□□□□□ -1.94e-17■■■□□ 17.7
TOP2A-201ENST00000423485 SIRPB2Q5JXA9 342 aa3.17□□□□□ -1.9
TOP2A-201ENST00000423485 ZNF385CQ66K41 422 aaPredicted RBP3.17□□□□□ -1.9
TOP2A-201ENST00000423485 LHFPL3Q86UP9 236 aa3.17□□□□□ -1.9
TOP2A-201ENST00000423485 DMRTC2Q8IXT2 367 aaPredicted RBP3.17□□□□□ -1.9
TOP2A-201ENST00000423485 ADGRF3Q8IZF5 1079 aa3.17□□□□□ -1.9
TOP2A-201ENST00000423485 ZNF676Q8N7Q3 588 aa3.17□□□□□ -1.9
TOP2A-201ENST00000423485 POC1AQ8NBT0 407 aa3.17□□□□□ -1.9
TOP2A-201ENST00000423485 CHST4Q8NCG5 386 aa3.17□□□□□ -1.9
TOP2A-201ENST00000423485 SPOCK2Q92563 424 aa3.17□□□□□ -1.9
TOP2A-201ENST00000423485 MRGPRX4Q96LA9 322 aa3.17□□□□□ -1.9
TOP2A-201ENST00000423485 PRO3102Q9H379 93 aa3.17□□□□□ -1.9
TOP2A-201ENST00000423485 DLGAP2Q9P1A6 1054 aa3.17□□□□□ -1.9
TOP2A-201ENST00000423485 RNF7Q9UBF6 113 aa3.17□□□□□ -1.9
TOP2A-201ENST00000423485 SMAD5-AS1Q9Y6J3 95 aa3.17□□□□□ -1.9
TOP2A-201ENST00000423485 A0A075B6Q4 140 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 EFCAB9A8MZ26 197 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 PHYHO14832 338 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 HPXP02790 462 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 IL6P05231 212 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 FAM228BP0C875 321 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 C4BPBP20851 252 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 SLC2A5P22732 501 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 SERPINB10P48595 397 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 TNFSF10P50591 281 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 PPP5CP53041 499 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 ERVK-25P63136 954 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 HSF1Q00613 529 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 ZNF844Q08AG5 666 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 NTRK2Q16620 822 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 FAM76BQ5HYJ3 339 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 FAM120AOSQ5T036 256 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 LIPJQ5W064 366 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 LCN8Q6JVE9 175 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 QSOX2Q6ZRP7 698 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 PDZD9Q8IXQ8 264 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 OR2L3Q8NG85 312 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 OR2T27Q8NH04 317 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 TMEM230Q96A57 120 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 C19orf60Q96EN9 201 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 ZNF778Q96MU6 729 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 GPR22Q99680 433 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 TMEM59Q9BXS4 323 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 IL21Q9HBE4 155 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 FAM120CQ9NX05 1096 aaKnown RBP3.16□□□□□ -1.9
TOP2A-201ENST00000423485 GFOD1Q9NXC2 390 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 DCAF16Q9NXF7 216 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 COA4Q9NYJ1 87 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 TGP01266 2768 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 PRR23D1E9PI22 279 aaPredicted RBP3.16□□□□□ -1.9
TOP2A-201ENST00000423485 SPAG7O75391 227 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 CBX6O95503 412 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 CTSBP07858 339 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 PRR23D2P0DMB1 279 aaPredicted RBP3.16□□□□□ -1.9
TOP2A-201ENST00000423485 NID1P14543 1247 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 PSME3P61289 254 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 CDK6Q00534 326 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 PRDX1Q06830 199 aaKnown RBP3.16□□□□□ -1.9
TOP2A-201ENST00000423485 RAB31Q13636 194 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 SMCO1Q147U7 214 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 PAFAH1B3Q15102 231 aaKnown RBP3.16□□□□□ -1.9
TOP2A-201ENST00000423485 VMA21Q3ZAQ7 101 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 OGFRL1Q5TC84 451 aaPredicted RBP3.16□□□□□ -1.9
TOP2A-201ENST00000423485 EBLN2Q6P2I7 272 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 SLC16A12Q6ZSM3 486 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 RTN4RL2Q86UN3 420 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 CXorf67Q86X51 503 aaPredicted RBP3.16□□□□□ -1.9
TOP2A-201ENST00000423485 ZNF101Q8IZC7 436 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 OR5AS1Q8N127 324 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 EIF4E3Q8N5X7 224 aaKnown RBP3.16□□□□□ -1.9
TOP2A-201ENST00000423485 OR10AD1Q8NGE0 317 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 WDR20Q8TBZ3 569 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 ST6GALNAC6Q969X2 333 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 MS4A4EQ96PG1 132 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 SPSB2Q99619 263 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 ZNF350Q9GZX5 532 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 KATNBL1Q9H079 304 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 THAP2Q9H0W7 228 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 OR10A4Q9H209 315 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 RNF167Q9H6Y7 350 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 IFT46Q9NQC8 304 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 INTS9Q9NV88 658 aaKnown RBP3.16□□□□□ -1.9
TOP2A-201ENST00000423485 NUFIP1Q9UHK0 495 aaKnown RBP3.16□□□□□ -1.9
TOP2A-201ENST00000423485 A0A0G2JLM5 398 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 TSPAN4O14817 238 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 SMAD6O43541 496 aaKnown RBP3.16□□□□□ -1.9
TOP2A-201ENST00000423485 NCR1O76036 304 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 DIRAS3O95661 229 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 C9P02748 559 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 MSMBP08118 114 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 CELA2BP08218 269 aaPredicted RBP3.16□□□□□ -1.9
TOP2A-201ENST00000423485 CLEC2LP0C7M8 214 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 MAOAP21397 527 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 CERS1P27544 350 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 RPS5P46782 204 aaKnown RBP3.16□□□□□ -1.9
TOP2A-201ENST00000423485 CLK1P49759 484 aaKnown RBP3.16□□□□□ -1.9
TOP2A-201ENST00000423485 RELAQ04206 551 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 PTPRRQ15256 657 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 DUSP7Q16829 419 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms