RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 GLT8D1Q68CQ7 371 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 TMEM81Q6P7N7 255 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 KCTD18Q6PI47 426 aaPredicted RBP14.17□□□□□ -0.14
CDH1-202ENST00000422392 HDDC2Q7Z4H3 204 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 ASB17Q8WXJ9 295 aa14.17□□□□□ -0.14
CDH1-202ENST00000422392 COL5A1P20908 1838 aaPredicted RBP14.16□□□□□ -0.14
CDH1-202ENST00000422392 TRAV14DV4A0A0A6YYC5 116 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 IGKV1D-43A0A0B4J1Z2 117 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 HSPB2A8KAH6 182 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 C2CD4DB7Z1M9 353 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 PLPP3O14495 311 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 CCSO14618 274 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 SIGLEC5O15389 551 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 CD2P06729 351 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 MYF5P13349 255 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 ROM1Q03395 351 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 SIGLEC14Q08ET2 396 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 ELAVL1Q15717 326 aaKnown RBP14.16□□□□□ -0.14
CDH1-202ENST00000422392 HSPB2Q16082 182 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 CD163Q86VB7 1156 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 ZBTB44Q8NCP5 570 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 OR52N5Q8NH56 324 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 THAP3Q8WTV1 239 aaPredicted RBP14.16□□□□□ -0.14
CDH1-202ENST00000422392 PMEPA1Q969W9 287 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 ARL5BQ96KC2 179 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 B3GNT4Q9C0J1 378 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 VSX1Q9NZR4 365 aaPredicted RBP14.16□□□□□ -0.14
CDH1-202ENST00000422392 MSRAQ9UJ68 235 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 MMACHCQ9Y4U1 282 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 DMDP11532 3685 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 LOC107986453A0A1B0GWG9 222 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 H3BMH7 237 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 NUPL2O15504 423 aaKnown RBP14.16□□□□□ -0.14
CDH1-202ENST00000422392 NPIPB7O75200 414 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 DXOO77932 396 aaKnown RBP14.16□□□□□ -0.14
CDH1-202ENST00000422392 TPPPO94811 219 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 IGFBP3P17936 291 aaPredicted RBP14.16□□□□□ -0.14
CDH1-202ENST00000422392 ACHEP22303 614 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 CFPP27918 469 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 DNASE1L1P49184 302 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 TAS2R19P59542 299 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 ACTBP60709 375 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 ACTG1P63261 375 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 NUP54Q7Z3B4 507 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 DCXRQ7Z4W1 244 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 OR4D6Q8NGJ1 314 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 OR1S1Q8NH92 325 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 OR1L3Q8NH93 324 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 CMBLQ96DG6 245 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 DUSP15Q9H1R2 295 aaPredicted RBP14.16□□□□□ -0.14
CDH1-202ENST00000422392 KLK13Q9UKR3 277 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 MKL2Q9ULH7 1088 aa14.16□□□□□ -0.14
CDH1-202ENST00000422392 LILRA5A6NI73 299 aa14.15□□□□□ -0.14
CDH1-202ENST00000422392 MT-ATP6P00846 226 aa14.15□□□□□ -0.14
CDH1-202ENST00000422392 POLR2HP52434 150 aaKnown RBP14.15□□□□□ -0.14
CDH1-202ENST00000422392 OR1D5P58170 312 aa14.15□□□□□ -0.14
CDH1-202ENST00000422392 GLO1Q04760 184 aa14.15□□□□□ -0.14
CDH1-202ENST00000422392 PMPCAQ10713 525 aa14.15□□□□□ -0.14
CDH1-202ENST00000422392 SLC22A6Q4U2R8 563 aa14.15□□□□□ -0.14
CDH1-202ENST00000422392 C12orf45Q8N5I9 185 aaPredicted RBP14.15□□□□□ -0.14
CDH1-202ENST00000422392 STEAP2Q8NFT2 490 aa14.15□□□□□ -0.14
CDH1-202ENST00000422392 PPA2Q9H2U2 334 aa14.15□□□□□ -0.14
CDH1-202ENST00000422392 ATXN7L1Q9ULK2 861 aaPredicted RBP14.15□□□□□ -0.14
CDH1-202ENST00000422392 A8MVM7 634 aa14.15□□□□□ -0.14
CDH1-202ENST00000422392 P2RY10O00398 339 aa14.15□□□□□ -0.14
CDH1-202ENST00000422392 IGLV3-19P01714 112 aa14.15□□□□□ -0.14
CDH1-202ENST00000422392 NME1P15531 152 aaKnown RBP14.15□□□□□ -0.14
CDH1-202ENST00000422392 PTGS2P35354 604 aa14.15□□□□□ -0.14
CDH1-202ENST00000422392 EIF1AXP47813 144 aaKnown RBP14.15□□□□□ -0.14
CDH1-202ENST00000422392 GMFBP60983 142 aa14.15□□□□□ -0.14
CDH1-202ENST00000422392 FAM74A1Q5RGS3 127 aa14.15□□□□□ -0.14
CDH1-202ENST00000422392 ATPAF1Q5TC12 328 aaPredicted RBP14.15□□□□□ -0.14
CDH1-202ENST00000422392 LIN54Q6MZP7 749 aa14.15□□□□□ -0.14
CDH1-202ENST00000422392 RTN4RL2Q86UN3 420 aa14.15□□□□□ -0.14
CDH1-202ENST00000422392 GKN2Q86XP6 184 aa14.15□□□□□ -0.14
CDH1-202ENST00000422392 FAM46BQ96A09 425 aa14.15□□□□□ -0.14
CDH1-202ENST00000422392 SEC22AQ96IW7 307 aa14.15□□□□□ -0.14
CDH1-202ENST00000422392 SLC6A7Q99884 636 aa14.15□□□□□ -0.14
CDH1-202ENST00000422392 CENPMQ9NSP4 180 aa14.15□□□□□ -0.14
CDH1-202ENST00000422392 MED29Q9NX70 200 aa14.15□□□□□ -0.14
CDH1-202ENST00000422392 PFDN2Q9UHV9 154 aa14.15□□□□□ -0.14
CDH1-202ENST00000422392 GPR160Q9UJ42 338 aa14.15□□□□□ -0.14
CDH1-202ENST00000422392 WIPF3A6NGB9 483 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 EIF4E2O60573 245 aaKnown RBP14.14□□□□□ -0.15
CDH1-202ENST00000422392 CYB5AP00167 134 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 MPGP29372 298 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 TAGLNQ01995 201 aaKnown RBP14.14□□□□□ -0.15
CDH1-202ENST00000422392 BEX5Q5H9J7 111 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 BPIFB2Q8N4F0 458 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 GVQW1Q8N7I0 195 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 POTEKPQ9BYX7 375 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.14□□□□□ -0.15
CDH1-202ENST00000422392 G6PC2Q9NQR9 355 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 FREM2Q5SZK8 3169 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 TMEM269A0A1B0GVZ9 245 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 ZNF736B4DX44 427 aaPredicted RBP14.14□□□□□ -0.15
CDH1-202ENST00000422392 SHISA8B8ZZ34 492 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 CDK2AP1O14519 115 aa14.14□□□□□ -0.15
CDH1-202ENST00000422392 SRSF10O75494 262 aaKnown RBP14.14□□□□□ -0.15
CDH1-202ENST00000422392 AHSA1O95433 338 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms