RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 OR4C3Q8NH37 302 aa13.15□□□□□ -0.3
CHRD-204ENST00000420973 FLVCR1-AS1Q8TAF5 88 aa13.15□□□□□ -0.3
CHRD-204ENST00000420973 CD180Q99467 661 aa13.15□□□□□ -0.3
CHRD-204ENST00000420973 ZNF350Q9GZX5 532 aa13.15□□□□□ -0.3
CHRD-204ENST00000420973 SLITRK2Q9H156 845 aa13.15□□□□□ -0.3
CHRD-204ENST00000420973 FAM86C1Q9NVL1 165 aa13.15□□□□□ -0.3
CHRD-204ENST00000420973 IMPA2O14732 288 aa13.15□□□□□ -0.3
CHRD-204ENST00000420973 TOX3O15405 576 aaPredicted RBP13.15□□□□□ -0.3
CHRD-204ENST00000420973 TCF21O43680 179 aa13.15□□□□□ -0.3
CHRD-204ENST00000420973 PDGFBP01127 241 aaPredicted RBP13.15□□□□□ -0.3
CHRD-204ENST00000420973 OPN1LWP04000 364 aa13.15□□□□□ -0.3
CHRD-204ENST00000420973 RBMS1P29558 406 aaKnown RBP13.15□□□□□ -0.3
CHRD-204ENST00000420973 MTNR1AP48039 350 aa13.15□□□□□ -0.3
CHRD-204ENST00000420973 DCDP81605 110 aaKnown RBP13.15□□□□□ -0.3
CHRD-204ENST00000420973 TAF13Q15543 124 aa13.15□□□□□ -0.3
CHRD-204ENST00000420973 HLA-DQA1Q5Y7H0 255 aa13.15□□□□□ -0.3
CHRD-204ENST00000420973 OR6K3Q8NGY3 331 aa13.15□□□□□ -0.3
CHRD-204ENST00000420973 OR52D1Q9H346 318 aa13.15□□□□□ -0.3
CHRD-204ENST00000420973 SLC2A4RGQ9NR83 387 aa13.15□□□□□ -0.3
CHRD-204ENST00000420973 KCNE5Q9UJ90 142 aa13.15□□□□□ -0.3
CHRD-204ENST00000420973 GTF2A1LQ9UNN4 478 aa13.15□□□□□ -0.3
CHRD-204ENST00000420973 ZNF217O75362 1048 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 ARG1P05089 322 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 SPARCP09486 303 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 FABP4P15090 132 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 RAB5AP20339 215 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 GABRA5P31644 462 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 LSM6P62312 80 aaKnown RBP13.14□□□□□ -0.31
CHRD-204ENST00000420973 FAM53BQ14153 422 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 ZNF619Q8N2I2 560 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 OR1J4Q8NGS1 313 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 OPN4Q9UHM6 478 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 SHISA7A6NL88 538 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 F10P00742 488 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 CD27P26842 260 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 FRKP42685 505 aaPredicted RBP13.14□□□□□ -0.31
CHRD-204ENST00000420973 PRKXP51817 358 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 BATFQ16520 125 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 ZNF770Q6IQ21 691 aaPredicted RBP13.14□□□□□ -0.31
CHRD-204ENST00000420973 MOB3CQ70IA8 216 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 OR6X1Q8NH79 312 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 SFXN5Q8TD22 340 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 TMEM239Q8WW34 195 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 S100A13Q99584 98 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 NUDT22Q9BRQ3 303 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 Q9N2J8 555 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 ACKR4Q9NPB9 350 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 CHRNA9Q9UGM1 479 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 SVILO95425 2214 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 MPDZO75970 2070 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 DVL2O14641 736 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 MGMTP16455 207 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 RBM34P42696 430 aaKnown RBP13.14□□□□□ -0.31
CHRD-204ENST00000420973 ARL9Q6T311 187 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 SDR9C7Q8NEX9 313 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 MOAP1Q96BY2 351 aa13.14□□□□□ -0.31
CHRD-204ENST00000420973 ZNF582Q96NG8 517 aaPredicted RBP13.14□□□□□ -0.31
CHRD-204ENST00000420973 C19orf53Q9UNZ5 99 aaPredicted RBP13.14□□□□□ -0.31
CHRD-204ENST00000420973 HMSDA8MTL9 139 aa13.13□□□□□ -0.31
CHRD-204ENST00000420973 CYR61O00622 381 aa13.13□□□□□ -0.31
CHRD-204ENST00000420973 SC5DO75845 299 aa13.13□□□□□ -0.31
CHRD-204ENST00000420973 ACVR1BP36896 505 aa13.13□□□□□ -0.31
CHRD-204ENST00000420973 PNLIPRP2P54317 469 aa13.13□□□□□ -0.31
CHRD-204ENST00000420973 OR10A3P58181 314 aa13.13□□□□□ -0.31
CHRD-204ENST00000420973 OR2A2Q6IF42 318 aa13.13□□□□□ -0.31
CHRD-204ENST00000420973 JAGN1Q8N5M9 183 aa13.13□□□□□ -0.31
CHRD-204ENST00000420973 ACBD4Q8NC06 268 aa13.13□□□□□ -0.31
CHRD-204ENST00000420973 OR52I1Q8NGK6 324 aa13.13□□□□□ -0.31
CHRD-204ENST00000420973 SCARF2Q96GP6 870 aaPredicted RBP13.13□□□□□ -0.31
CHRD-204ENST00000420973 TNFRSF13CQ96RJ3 184 aa13.13□□□□□ -0.31
CHRD-204ENST00000420973 TMEM208Q9BTX3 173 aa13.13□□□□□ -0.31
CHRD-204ENST00000420973 PARD6GQ9BYG4 376 aaPredicted RBP13.13□□□□□ -0.31
CHRD-204ENST00000420973 COMMD9Q9P000 198 aa13.13□□□□□ -0.31
CHRD-204ENST00000420973 MED31Q9Y3C7 131 aa13.13□□□□□ -0.31
CHRD-204ENST00000420973 A6NNC1 897 aa13.13□□□□□ -0.31
CHRD-204ENST00000420973 METTL12A8MUP2 240 aa13.13□□□□□ -0.31
CHRD-204ENST00000420973 RGS9O75916 674 aaPredicted RBP13.13□□□□□ -0.31
CHRD-204ENST00000420973 MAKP20794 623 aa13.13□□□□□ -0.31
CHRD-204ENST00000420973 CD1CP29017 333 aa13.13□□□□□ -0.31
CHRD-204ENST00000420973 CXCL12P48061 93 aa13.13□□□□□ -0.31
CHRD-204ENST00000420973 WDR88Q6ZMY6 472 aa13.13□□□□□ -0.31
CHRD-204ENST00000420973 C16orf52Q8NHV5 167 aa13.13□□□□□ -0.31
CHRD-204ENST00000420973 BPIFA2Q96DR5 249 aa13.13□□□□□ -0.31
CHRD-204ENST00000420973 FN3KRPQ9HA64 309 aa13.13□□□□□ -0.31
CHRD-204ENST00000420973 PARPBPQ9NWS1 579 aa13.13□□□□□ -0.31
CHRD-204ENST00000420973 HEATR5AQ86XA9 2040 aa13.13□□□□□ -0.31
CHRD-204ENST00000420973 TGFBR3LH3BV60 316 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 BCAT2O15382 392 aaPredicted RBP13.12□□□□□ -0.31
CHRD-204ENST00000420973 CDC40O60508 579 aaKnown RBP eCLIP13.12□□□□□ -0.31
CHRD-204ENST00000420973 RAC2P15153 192 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 AGAP20933 346 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 HMGA2P52926 109 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 OR2T33Q8NG76 320 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 NEK7Q8TDX7 302 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 ZMYND19Q96E35 227 aaPredicted RBP13.12□□□□□ -0.31
CHRD-204ENST00000420973 RPH3ALQ9UNE2 315 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 ADAM18Q9Y3Q7 739 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 TRAPPC13A5PLN9 417 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 J3QLW9 94 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 PPP1R2P9O14990 202 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms