RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 RCE1Q9Y256 329 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 B3GALT5Q9Y2C3 310 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 NCOA6Q14686 2063 aaPredicted RBP7.83□□□□□ -1.16
SNCA-206ENST00000420646 OR2M5A3KFT3 312 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 TP53I11O14683 189 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 TRAF3IP2O43734 574 aaPredicted RBP7.83□□□□□ -1.16
SNCA-206ENST00000420646 ZIC3O60481 467 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 ARSBP15848 533 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 PTH2RP49190 550 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 DAP3P51398 398 aaKnown RBP7.83□□□□□ -1.16
SNCA-206ENST00000420646 SSR4P51571 173 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 GALK2Q01415 458 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 GUCA2AQ02747 115 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 PLA1AQ53H76 456 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 UBE2NLQ5JXB2 153 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 TMEM69Q5SWH9 247 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 DHRS13Q6UX07 377 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 NAA40Q86UY6 237 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 ZBTB44Q8NCP5 570 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 CT55Q8WUE5 264 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 ZNF837Q96EG3 531 aaPredicted RBP7.83□□□□□ -1.16
SNCA-206ENST00000420646 SLITRK2Q9H156 845 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 PTGES2Q9H7Z7 377 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 HPF1Q9NWY4 346 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 ASH2LQ9UBL3 628 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 TRBV5-7A0A0A0MS05 114 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 A0A0A6YYJ9 748 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 GPR171O14626 319 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 CDX4O14627 284 aaPredicted RBP7.83□□□□□ -1.16
SNCA-206ENST00000420646 TNFSF11O14788 317 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 IGHMP01871 453 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 JMJD7P0C870 316 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 ZNF43P17038 809 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 DCTDP32321 178 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 PTGS2P35354 604 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 PRSS12P56730 875 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 CLDN17P56750 224 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 IFITM2Q01629 132 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 RASGEF1BQ0VAM2 473 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 PHYHD1Q5SRE7 291 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 SLC22A10Q63ZE4 541 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 SPINK14Q6IE38 97 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 KCTD18Q6PI47 426 aaPredicted RBP7.83□□□□□ -1.16
SNCA-206ENST00000420646 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.83□□□□□ -1.16
SNCA-206ENST00000420646 RNF170Q96K19 258 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 MARVELD1Q9BSK0 173 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 MRPL13Q9BYD1 178 aaKnown RBP7.83□□□□□ -1.16
SNCA-206ENST00000420646 NXT1Q9UKK6 140 aaKnown RBP7.83□□□□□ -1.16
SNCA-206ENST00000420646 POLR1DQ9Y2S0 133 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 ZNF407Q9C0G0 2248 aa7.83□□□□□ -1.16
SNCA-206ENST00000420646 PCSK5Q92824 1860 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 DNAJC13O75165 2243 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 HMX3A6NHT5 357 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 C9orf172C9J069 976 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 ZNHIT1O43257 154 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 WDPCPO95876 746 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 CD1AP06126 327 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 QDPRP09417 244 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 H2BFMP0C1H6 154 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 MMP15P51511 669 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 SUMO3P55854 103 aaPredicted RBP7.82□□□□□ -1.16
SNCA-206ENST00000420646 OC90Q02509 493 aaPredicted RBP7.82□□□□□ -1.16
SNCA-206ENST00000420646 ROM1Q03395 351 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 ZP4Q12836 540 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 SNTB2Q13425 540 aaKnown RBP7.82□□□□□ -1.16
SNCA-206ENST00000420646 C2orf76Q3KRA6 126 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 ZFP69Q49AA0 526 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 GLYATL3Q5SZD4 288 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 CATSPERDQ86XM0 798 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 LRRC18Q8N456 261 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 FADS6Q8N9I5 356 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 DACT3Q96B18 629 aaPredicted RBP7.82□□□□□ -1.16
SNCA-206ENST00000420646 SLAMF6Q96DU3 332 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 SLC25A44Q96H78 314 aaPredicted RBP7.82□□□□□ -1.16
SNCA-206ENST00000420646 RBP7Q96R05 134 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 CACNG6Q9BXT2 260 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 POTEKPQ9BYX7 375 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 G6PC2Q9NQR9 355 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 ZNF319Q9P2F9 582 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 OR52A1Q9UKL2 312 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 FOXJ3Q9UPW0 622 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 DHDHQ9UQ10 334 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 CAMK2AQ9UQM7 478 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 LHFPL6Q9Y693 200 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 LOC107986453A0A1B0GWG9 222 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 A0A1W2PQ72 361 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 PDCD5O14737 125 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 KHDRBS3O75525 346 aaKnown RBP7.82□□□□□ -1.16
SNCA-206ENST00000420646 PGA4P0DJD7 388 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 PGA3P0DJD8 388 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 ACP1P24666 158 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 MSX1P28360 303 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 POU3F4P49335 361 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 OPN5Q6U736 354 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 RTN4RL2Q86UN3 420 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 OR1J4Q8NGS1 313 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 OR13C3Q8NGS6 347 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 NKD1Q969G9 470 aa7.82□□□□□ -1.16
SNCA-206ENST00000420646 ZNF486Q96H40 463 aaPredicted RBP7.82□□□□□ -1.16
SNCA-206ENST00000420646 HES7Q9BYE0 225 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms