RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 ACTBP60709 375 aa12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 LSM6P62312 80 aaKnown RBP12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 ACTG1P63261 375 aa12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 SSPNQ14714 243 aa12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 ETFDHQ16134 617 aa12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 OR2AJ1Q8NGZ0 328 aa12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 KCNE4Q8WWG9 221 aa12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 TAAR9Q96RI9 348 aa12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 MED28Q9H204 178 aa12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 SCPEP1Q9HB40 452 aa12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 G6PC2Q9NQR9 355 aa12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 MCUBQ9NWR8 336 aa12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 MED29Q9NX70 200 aa12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 CLEC4AQ9UMR7 237 aa12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 EMC9Q9Y3B6 208 aa12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 MRPS18CQ9Y3D5 142 aaKnown RBP12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 A0A1B0GVI7 797 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 LOC107986453A0A1B0GWG9 222 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 GGT3PA6NGU5 568 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 STK17BO94768 372 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 GPANK1O95872 356 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 PNPP00491 289 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 RAB6AP20340 208 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 GRB2P62993 217 aaKnown RBP12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 FMODQ06828 376 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 MADCAM1Q13477 382 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 CDK10Q15131 360 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 BCL2A1Q16548 175 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 C10orf128Q5T292 105 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 RAB12Q6IQ22 244 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 H3F3CQ6NXT2 135 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 SLC25A47Q6Q0C1 308 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 C6orf15Q6UXA7 325 aaPredicted RBP12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 ADGRE4PQ86SQ3 457 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 ELMOD2Q8IZ81 293 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 OR51A4Q8NGJ6 313 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 OR13C3Q8NGS6 347 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 OR2I1PQ8NGU4 316 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 C11orf40Q8WZ69 217 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 ITFG2Q969R8 447 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 FAM3DQ96BQ1 224 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 SLAMF6Q96DU3 332 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 MED30Q96HR3 178 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 HYLS1Q96M11 299 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 SORCS2Q96PQ0 1159 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 NPAS1Q99742 590 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 NUDT16L1Q9BRJ7 211 aaKnown RBP12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 UQCC2Q9BRT2 126 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 UTP23Q9BRU9 249 aaKnown RBP12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 SF3B5Q9BWJ5 86 aaKnown RBP12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 GHITMQ9H3K2 345 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 SLA2Q9H6Q3 261 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 RANGRFQ9HD47 186 aaPredicted RBP12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 EMC7Q9NPA0 242 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 ING1Q9UK53 422 aaPredicted RBP12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 DKKL1Q9UK85 242 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 POU2F3Q9UKI9 436 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 TCFL5Q9UL49 500 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 GTF2A1LQ9UNN4 478 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 LOXL2Q9Y4K0 774 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 KIAA1549Q9HCM3 1950 aa12.96□□□□□ -0.33
HLA-DPA1-242ENST00000419277 H7C417 338 aa12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 LINC01387J3KSC0 135 aa12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 TGM6O95932 706 aa12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 APOC1P02654 83 aa12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 H2AFB2P0C5Z0 115 aa12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 GABRA1P14867 456 aa12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 PSMB1P20618 241 aaKnown RBP12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 HTR2CP28335 458 aa12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 HSD11B1P28845 292 aa12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 SRD5A2P31213 254 aa12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 POU3F4P49335 361 aa12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 MECP2P51608 486 aaKnown RBP12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 AGFG1P52594 562 aaKnown RBP12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 RAC1P63000 192 aa12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 MFGE8Q08431 387 aaPredicted RBP12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 C1orf100Q5SVJ3 147 aa12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 JMJD6Q6NYC1 403 aaPredicted RBP12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 SERPINA12Q8IW75 414 aa12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 KDM8Q8N371 416 aa12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 FAM109AQ8N4B1 249 aa12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 OR10AC1Q8NH08 325 aa12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 GRPEL2Q8TAA5 225 aa12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 RHBDD1Q8TEB9 315 aa12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 DNAJA3Q96EY1 480 aa12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 GON7Q9BXV9 100 aa12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 AKIRIN1Q9H9L7 192 aaPredicted RBP12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 FAM206AQ9NX38 181 aa12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 MTFP1Q9UDX5 166 aa12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 FBXL3Q9UKT7 428 aa12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 POLR1DQ9Y2S0 133 aa12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 CACNA1CQ13936 2221 aa12.96□□□□□ -0.34
HLA-DPA1-242ENST00000419277 A0A1B0GUH1 482 aa12.95□□□□□ -0.34
HLA-DPA1-242ENST00000419277 M0R296 226 aa12.95□□□□□ -0.34
HLA-DPA1-242ENST00000419277 CTAG2O75638 210 aa12.95□□□□□ -0.34
HLA-DPA1-242ENST00000419277 RBBP9O75884 186 aa12.95□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ITGA5P08648 1049 aa12.95□□□□□ -0.34
HLA-DPA1-242ENST00000419277 GIFP27352 417 aa12.95□□□□□ -0.34
HLA-DPA1-242ENST00000419277 GZMKP49863 264 aa12.95□□□□□ -0.34
HLA-DPA1-242ENST00000419277 TNK1Q13470 666 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms