RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 SELENOKQ9Y6D0 94 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 CDH10Q9Y6N8 788 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 BRCA2P51587 3418 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 PLXNA4Q9HCM2 1894 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 KIAA1671Q9BY89 1806 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 PIKFYVEQ9Y2I7 2098 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 PLXNB3Q9ULL4 1909 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 MKI67P46013 3256 aaKnown RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 IGLV3-16A0A075B6K0 115 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 MEIKINA0A087WXM9 373 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 LINC00854A0A1B0GVQ3 168 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 GNG14A0A1W2PPG7 69 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 NAP1L6A6NFF2 107 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 C5orf52A6NGY3 159 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 FAM25EA8MYX2 175 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 C5orf58C9J3I9 102 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 H3BN98 237 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 GFYI3L273 518 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 M0R233 179 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 CTDSPLO15194 276 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 FABP7O15540 132 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 FLRT2O43155 660 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 NDUFA2O43678 99 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 GSTZ1O43708 216 aaPredicted RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 CHP2O43745 196 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 OR10H3O60404 316 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 FCGR3BO75015 233 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 PSIP1O75475 530 aaKnown RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 STX11O75558 287 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 SC5DO75845 299 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 LRATO95237 230 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 DUS4LO95620 317 aaKnown RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 SNAI1O95863 264 aaPredicted RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 ECDO95905 644 aaPredicted RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 PAHP00439 452 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 SOD1P00441 154 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 IGHEP01854 428 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 CATP04040 527 aaKnown RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 CSF2P04141 144 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 ANXA4P09525 319 aaPredicted RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 ZDHHC11BP0C7U3 371 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 LAMP1P11279 417 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 CPN1P15169 458 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 NPR2P20594 1047 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 IDSP22304 550 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 AADACP22760 399 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 MAPK3P27361 379 aaPredicted RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 PPP2R1BP30154 601 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 LCN1P31025 176 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 SOAT1P35610 550 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 CHI3L1P36222 383 aaPredicted RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 ATP5C1P36542 298 aaKnown RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 SOX3P41225 446 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 BDKRB1P46663 353 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 RGRP47804 291 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 OR3A2P47893 321 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 PITPNBP48739 271 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 CCT3P49368 545 aaKnown RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 CRYBA2P53672 197 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 CLDN17P56750 224 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 TAS2R43P59537 309 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 AP3S2P59780 193 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 DCDC1P59894 354 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 HILS1P60008 231 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 DSTNP60981 165 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 RHOAP61586 193 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 CYCSP99999 105 aaKnown RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 DHODHQ02127 395 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 SEMG2Q02383 582 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 IRF8Q02556 426 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 BCL2L1Q07817 233 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 MGAT3Q09327 533 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 C2orf80Q0P641 193 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 SCRN3Q0VDG4 424 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 TWF1Q12792 350 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 CNTN1Q12860 1018 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 CHIT1Q13231 466 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 SRSF9Q13242 221 aaKnown RBP eCLIP2.25□□□□□ -2.05
VPS41-206ENST00000418457 PDE7AQ13946 482 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 GNA13Q14344 377 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 GPR176Q14439 515 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 C18orf21Q32NC0 220 aaPredicted RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 MPP7Q5T2T1 576 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 PRAMEF8Q5VWM4 474 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 PRAMEF7Q5VXH5 474 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 LIPKQ5VXJ0 399 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 FAM219BQ5XKK7 198 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 HBMQ6B0K9 141 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 HIST2H2AA3Q6FI13 130 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 LAMTOR1Q6IAA8 161 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 C22orf42Q6IC83 251 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 OR4C11Q6IEV9 310 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 FAM166AQ6J272 317 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 SLC27A4Q6P1M0 643 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 MED27Q6P2C8 311 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 PRSS55Q6UWB4 352 aaPredicted RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 ARSKQ6UWY0 536 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 BTNL8Q6UX41 500 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 ANGPTL8Q6UXH0 198 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 FAM151BQ6UXP7 276 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms