RNA–Protein interactions for RNA: ENST00000417495.7

SP140-204, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-204ENST00000417495 XIRP2A4UGR9 3374 aa8.04□□□□□ -1.12
SP140-204ENST00000417495 LOC100289279A0A1B0GTE1 492 aa8.04□□□□□ -1.12
SP140-204ENST00000417495 A0A1B0GTL3 188 aa8.04□□□□□ -1.12
SP140-204ENST00000417495 K7ERU9 68 aa8.04□□□□□ -1.12
SP140-204ENST00000417495 PEX12O00623 359 aa8.04□□□□□ -1.12
SP140-204ENST00000417495 TMPRSS2O15393 492 aa8.04□□□□□ -1.12
SP140-204ENST00000417495 RAP2AP10114 183 aa8.04□□□□□ -1.12
SP140-204ENST00000417495 DRD2P14416 443 aa8.04□□□□□ -1.12
SP140-204ENST00000417495 PRDX3P30048 256 aaKnown RBP8.04□□□□□ -1.12
SP140-204ENST00000417495 SDC2P34741 201 aa8.04□□□□□ -1.12
SP140-204ENST00000417495 CBFBQ13951 182 aa8.04□□□□□ -1.12
SP140-204ENST00000417495 ABRAXAS2Q15018 415 aa8.04□□□□□ -1.12
SP140-204ENST00000417495 VMACQ2NL98 169 aa8.04□□□□□ -1.12
SP140-204ENST00000417495 OCIAD2Q56VL3 154 aa8.04□□□□□ -1.12
SP140-204ENST00000417495 LCTLQ6UWM7 567 aa8.04□□□□□ -1.12
SP140-204ENST00000417495 MRPL21Q7Z2W9 205 aaKnown RBP8.04□□□□□ -1.12
SP140-204ENST00000417495 LRRTM1Q86UE6 522 aa8.04□□□□□ -1.12
SP140-204ENST00000417495 LMNTD1Q8N9Z9 388 aa8.04□□□□□ -1.12
SP140-204ENST00000417495 OR5L1Q8NGL2 311 aa8.04□□□□□ -1.12
SP140-204ENST00000417495 NUS1Q96E22 293 aa8.04□□□□□ -1.12
SP140-204ENST00000417495 SCARF2Q96GP6 870 aaPredicted RBP8.04□□□□□ -1.12
SP140-204ENST00000417495 RIOK2Q9BVS4 552 aaKnown RBP8.04□□□□□ -1.12
SP140-204ENST00000417495 ARL6Q9H0F7 186 aa8.04□□□□□ -1.12
SP140-204ENST00000417495 SLC25A19Q9HC21 320 aa8.04□□□□□ -1.12
SP140-204ENST00000417495 ARL15Q9NXU5 204 aa8.04□□□□□ -1.12
SP140-204ENST00000417495 TNFRSF18Q9Y5U5 241 aa8.04□□□□□ -1.12
SP140-204ENST00000417495 VCANP13611 3396 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 LOC105371242A0A075B767 164 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 HEPACAM2A8MVW5 462 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 ZNF705EA8MWA4 302 aaPredicted RBP8.03□□□□□ -1.12
SP140-204ENST00000417495 LOC730098B7Z3J9 87 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 SLC19A2O60779 497 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 C1QCP02747 245 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 HOXB2P14652 356 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 GKP32189 559 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 OPRD1P41143 372 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 GSK3BP49841 420 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 ZP1P60852 638 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 PSG6Q00889 435 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 RBPJQ06330 500 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 TMEM115Q12893 351 aaPredicted RBP8.03□□□□□ -1.12
SP140-204ENST00000417495 MAD2L1BPQ15013 274 aaPredicted RBP8.03□□□□□ -1.12
SP140-204ENST00000417495 RABL3Q5HYI8 236 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 SPATA46Q5T0L3 261 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 FRG2Q64ET8 278 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 Q6ZVL8 140 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 MTSS1LQ765P7 747 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 VTCN1Q7Z7D3 282 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 SPICQ8N5J4 248 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 PIGXQ8TBF5 258 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 TOMM40LQ969M1 308 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 KCTD12Q96CX2 325 aaKnown RBP8.03□□□□□ -1.12
SP140-204ENST00000417495 FRG2BQ96QU4 278 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 SRMSQ9H3Y6 488 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 ACKR4Q9NPB9 350 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 USP36Q9P275 1121 aaKnown RBP8.03□□□□□ -1.12
SP140-204ENST00000417495 MGAT4DA6NG13 374 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 ZNF670-ZNF695F2Z2N8 137 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 KLRC4-KLRK1H3BQV0 150 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 TOMM40O96008 361 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 PDGFBP01127 241 aaPredicted RBP8.03□□□□□ -1.12
SP140-204ENST00000417495 GCGP01275 180 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 UCHL1P09936 223 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 EPXP11678 715 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 AMD1P17707 334 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 MAKP20794 623 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 ANOS1P23352 680 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 GZMMP51124 257 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 CRYBA4P53673 196 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 DIO3P55073 304 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 NDUFA6P56556 154 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 UFM1P61960 85 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 RUNX3Q13761 415 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 B3GLCTQ6Y288 498 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 SLC35D2Q76EJ3 337 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 FAM220AQ7Z4H9 259 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 OR6K2Q8NGY2 324 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 SLC25A46Q96AG3 418 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 TMEM159Q96B96 161 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 RPUSD4Q96CM3 377 aaKnown RBP8.03□□□□□ -1.12
SP140-204ENST00000417495 ITCHQ96J02 903 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 GABRG3Q99928 467 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 PITPNC1Q9UKF7 332 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 EXO1Q9UQ84 846 aaKnown RBP8.03□□□□□ -1.12
SP140-204ENST00000417495 BTRCQ9Y297 605 aa8.03□□□□□ -1.12
SP140-204ENST00000417495 CASKO14936 926 aa8.02□□□□□ -1.13
SP140-204ENST00000417495 CDC40O60508 579 aaKnown RBP eCLIP8.02□□□□□ -1.13
SP140-204ENST00000417495 OR2C1O95371 312 aa8.02□□□□□ -1.13
SP140-204ENST00000417495 C1orf105O95561 183 aa8.02□□□□□ -1.13
SP140-204ENST00000417495 TFP02787 698 aa8.02□□□□□ -1.13
SP140-204ENST00000417495 TBC1D3HP0C7X1 549 aa8.02□□□□□ -1.13
SP140-204ENST00000417495 ALPPL2P10696 532 aa8.02□□□□□ -1.13
SP140-204ENST00000417495 PNLIPRP2P54317 469 aa8.02□□□□□ -1.13
SP140-204ENST00000417495 RPS14P62263 151 aaKnown RBP8.02□□□□□ -1.13
SP140-204ENST00000417495 HGFACQ04756 655 aa8.02□□□□□ -1.13
SP140-204ENST00000417495 AGBL4Q5VU57 503 aa8.02□□□□□ -1.13
SP140-204ENST00000417495 ZNF57Q68EA5 555 aaPredicted RBP8.02□□□□□ -1.13
SP140-204ENST00000417495 TCTN3Q6NUS6 607 aa8.02□□□□□ -1.13
SP140-204ENST00000417495 RPS27LQ71UM5 84 aaKnown RBP8.02□□□□□ -1.13
SP140-204ENST00000417495 TMEM144Q7Z5S9 345 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms