RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 HMGA2P52926 109 aa13.35□□□□□ -0.27
ITGB1-204ENST00000417122 LSM6P62312 80 aaKnown RBP13.35□□□□□ -0.27
ITGB1-204ENST00000417122 GLO1Q04760 184 aa13.35□□□□□ -0.27
ITGB1-204ENST00000417122 TSPAN31Q12999 210 aa13.35□□□□□ -0.27
ITGB1-204ENST00000417122 AQP6Q13520 282 aa13.35□□□□□ -0.27
ITGB1-204ENST00000417122 TRIM25Q14258 630 aaKnown RBP13.35□□□□□ -0.27
ITGB1-204ENST00000417122 TRIP10Q15642 601 aa13.35□□□□□ -0.27
ITGB1-204ENST00000417122 MBNL2Q5VZF2 373 aaKnown RBP13.35□□□□□ -0.27
ITGB1-204ENST00000417122 OTPQ5XKR4 325 aa13.35□□□□□ -0.27
ITGB1-204ENST00000417122 FAM166AQ6J272 317 aa13.35□□□□□ -0.27
ITGB1-204ENST00000417122 LCN8Q6JVE9 175 aa13.35□□□□□ -0.27
ITGB1-204ENST00000417122 PGBD2Q6P3X8 592 aa13.35□□□□□ -0.27
ITGB1-204ENST00000417122 ARL9Q6T311 187 aa13.35□□□□□ -0.27
ITGB1-204ENST00000417122 RFPL4BQ6ZWI9 263 aa13.35□□□□□ -0.27
ITGB1-204ENST00000417122 JAZF1Q86VZ6 243 aa13.35□□□□□ -0.27
ITGB1-204ENST00000417122 DHFR2Q86XF0 187 aa13.35□□□□□ -0.27
ITGB1-204ENST00000417122 YIPF5Q969M3 257 aa13.35□□□□□ -0.27
ITGB1-204ENST00000417122 SAMD8Q96LT4 415 aa13.35□□□□□ -0.27
ITGB1-204ENST00000417122 TSSK2Q96PF2 358 aa13.35□□□□□ -0.27
ITGB1-204ENST00000417122 IFT27Q9BW83 186 aa13.35□□□□□ -0.27
ITGB1-204ENST00000417122 OR2J1Q9GZK6 312 aa13.35□□□□□ -0.27
ITGB1-204ENST00000417122 LYVE1Q9Y5Y7 322 aa13.35□□□□□ -0.27
ITGB1-204ENST00000417122 LOC100289279A0A1B0GTE1 492 aa13.34□□□□□ -0.27
ITGB1-204ENST00000417122 TNFRSF11BO00300 401 aa13.34□□□□□ -0.27
ITGB1-204ENST00000417122 ARPC3O15145 178 aa13.34□□□□□ -0.27
ITGB1-204ENST00000417122 NOS3P29474 1203 aa13.34□□□□□ -0.27
ITGB1-204ENST00000417122 MPV17P39210 176 aa13.34□□□□□ -0.27
ITGB1-204ENST00000417122 MAGEA2P43356 314 aa13.34□□□□□ -0.27
ITGB1-204ENST00000417122 GPR6P46095 362 aaPredicted RBP13.34□□□□□ -0.27
ITGB1-204ENST00000417122 HTR5AP47898 357 aa13.34□□□□□ -0.27
ITGB1-204ENST00000417122 CENPAP49450 140 aa13.34□□□□□ -0.27
ITGB1-204ENST00000417122 PPP1CBP62140 327 aa13.34□□□□□ -0.27
ITGB1-204ENST00000417122 CCL8P80075 99 aa13.34□□□□□ -0.27
ITGB1-204ENST00000417122 MRPS11P82912 194 aaKnown RBP13.34□□□□□ -0.27
ITGB1-204ENST00000417122 MS4A2Q01362 244 aa13.34□□□□□ -0.27
ITGB1-204ENST00000417122 PCGF3Q3KNV8 242 aa13.34□□□□□ -0.27
ITGB1-204ENST00000417122 LEG1Q6P5S2 330 aa13.34□□□□□ -0.27
ITGB1-204ENST00000417122 DNM1P34Q6PK57 102 aa13.34□□□□□ -0.27
ITGB1-204ENST00000417122 VASH1Q7L8A9 365 aaPredicted RBP13.34□□□□□ -0.27
ITGB1-204ENST00000417122 KLF14Q8TD94 323 aaPredicted RBP13.34□□□□□ -0.27
ITGB1-204ENST00000417122 IPCEF1Q8WWN9 437 aaPredicted RBP13.34□□□□□ -0.27
ITGB1-204ENST00000417122 GTF3AQ92664 365 aaKnown RBP13.34□□□□□ -0.27
ITGB1-204ENST00000417122 SNX18Q96RF0 628 aa13.34□□□□□ -0.27
ITGB1-204ENST00000417122 SOX7Q9BT81 388 aa13.34□□□□□ -0.27
ITGB1-204ENST00000417122 MAGIXQ9H6Y5 334 aa13.34□□□□□ -0.27
ITGB1-204ENST00000417122 ZNF275Q9NSD4 429 aaPredicted RBP13.34□□□□□ -0.27
ITGB1-204ENST00000417122 NKIRAS2Q9NYR9 191 aa13.34□□□□□ -0.27
ITGB1-204ENST00000417122 PLEK2Q9NYT0 353 aa13.34□□□□□ -0.27
ITGB1-204ENST00000417122 ASH2LQ9UBL3 628 aa13.34□□□□□ -0.27
ITGB1-204ENST00000417122 CDC42EP3Q9UKI2 254 aa13.34□□□□□ -0.27
ITGB1-204ENST00000417122 KCNS2Q9ULS6 477 aa13.34□□□□□ -0.27
ITGB1-204ENST00000417122 PRPF19Q9UMS4 504 aaKnown RBP13.34□□□□□ -0.27
ITGB1-204ENST00000417122 B9D1Q9UPM9 204 aa13.34□□□□□ -0.27
ITGB1-204ENST00000417122 H3BSA7 217 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 DCTN6O00399 190 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 ABHD16AO95870 558 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 GPANK1O95872 356 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 RENP00797 406 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 TGFAP01135 160 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 HIST1H1CP16403 213 aaKnown RBP13.33□□□□□ -0.28
ITGB1-204ENST00000417122 IL2RGP31785 369 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 ZNF81P51508 661 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 TMEM33P57088 247 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 KCNMB1Q16558 191 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 TSTQ16762 297 aaKnown RBP13.33□□□□□ -0.28
ITGB1-204ENST00000417122 TMEM255AQ5JRV8 349 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 PGM2L1Q6PCE3 622 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 ZNF620Q6ZNG0 422 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 LINC00471Q8N535 108 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 OR9Q2Q8NGE9 314 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 OR4K13Q8NH42 304 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 HPS1Q92902 700 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 NMNAT3Q96T66 252 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 BTBD10Q9BSF8 475 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 BEX2Q9BXY8 128 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 TRIM15Q9C019 465 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 C1orf21Q9H246 121 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 SRA1Q9HD15 236 aaKnown RBP13.33□□□□□ -0.28
ITGB1-204ENST00000417122 DECR2Q9NUI1 292 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 TBCCD1Q9NVR7 557 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 FAM53CQ9NYF3 392 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 TAS2R1Q9NYW7 299 aa13.33□□□□□ -0.28
ITGB1-204ENST00000417122 IGLV1-36A0A0B4J1U3 117 aa13.32□□□□□ -0.28
ITGB1-204ENST00000417122 PLSCR5A0PG75 271 aa13.32□□□□□ -0.28
ITGB1-204ENST00000417122 IDH3BO43837 385 aa13.32□□□□□ -0.28
ITGB1-204ENST00000417122 RP2O75695 350 aa13.32□□□□□ -0.28
ITGB1-204ENST00000417122 CCNB2O95067 398 aa13.32□□□□□ -0.28
ITGB1-204ENST00000417122 IGFBP5P24593 272 aa13.32□□□□□ -0.28
ITGB1-204ENST00000417122 MMP15P51511 669 aa13.32□□□□□ -0.28
ITGB1-204ENST00000417122 MEP1BQ16820 701 aa13.32□□□□□ -0.28
ITGB1-204ENST00000417122 FAM98BQ52LJ0 330 aaKnown RBP13.32□□□□□ -0.28
ITGB1-204ENST00000417122 CCDC92Q53HC0 331 aaPredicted RBP13.32□□□□□ -0.28
ITGB1-204ENST00000417122 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.32□□□□□ -0.28
ITGB1-204ENST00000417122 OR6V1Q8N148 313 aa13.32□□□□□ -0.28
ITGB1-204ENST00000417122 SDR9C7Q8NEX9 313 aa13.32□□□□□ -0.28
ITGB1-204ENST00000417122 OR52L1Q8NGH7 329 aa13.32□□□□□ -0.28
ITGB1-204ENST00000417122 OR4C15Q8NGM1 316 aa13.32□□□□□ -0.28
ITGB1-204ENST00000417122 POP5Q969H6 163 aaKnown RBP13.32□□□□□ -0.28
ITGB1-204ENST00000417122 ASB9Q96DX5 294 aa13.32□□□□□ -0.28
ITGB1-204ENST00000417122 SHARPINQ9H0F6 387 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms