RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 SGCEO43556 437 aa16.15■□□□□ 0.18
TRIM56-202ENST00000412507 IDH3BO43837 385 aa16.15■□□□□ 0.18
TRIM56-202ENST00000412507 DOK2O60496 412 aa16.15■□□□□ 0.18
TRIM56-202ENST00000412507 CST1P01037 141 aa16.15■□□□□ 0.18
TRIM56-202ENST00000412507 DAOP14920 347 aa16.15■□□□□ 0.18
TRIM56-202ENST00000412507 KLF3P57682 345 aaPredicted RBP16.15■□□□□ 0.18
TRIM56-202ENST00000412507 LSM6P62312 80 aaKnown RBP16.15■□□□□ 0.18
TRIM56-202ENST00000412507 GABPB1Q06547 395 aaPredicted RBP16.15■□□□□ 0.18
TRIM56-202ENST00000412507 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.15■□□□□ 0.18
TRIM56-202ENST00000412507 SCRN3Q0VDG4 424 aa16.15■□□□□ 0.18
TRIM56-202ENST00000412507 BNIP1Q12981 228 aa16.15■□□□□ 0.18
TRIM56-202ENST00000412507 AQP6Q13520 282 aa16.15■□□□□ 0.18
TRIM56-202ENST00000412507 FLOT2Q14254 428 aa16.15■□□□□ 0.18
TRIM56-202ENST00000412507 MEP1BQ16820 701 aa16.15■□□□□ 0.18
TRIM56-202ENST00000412507 SPATA46Q5T0L3 261 aa16.15■□□□□ 0.18
TRIM56-202ENST00000412507 RPL13AP3Q6NVV1 102 aa16.15■□□□□ 0.18
TRIM56-202ENST00000412507 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.15■□□□□ 0.18
TRIM56-202ENST00000412507 RASSF6Q6ZTQ3 369 aa16.15■□□□□ 0.18
TRIM56-202ENST00000412507 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.15■□□□□ 0.18
TRIM56-202ENST00000412507 SPATA24Q86W54 205 aa16.15■□□□□ 0.18
TRIM56-202ENST00000412507 OR6V1Q8N148 313 aa16.15■□□□□ 0.18
TRIM56-202ENST00000412507 OR52E2Q8NGJ4 325 aa16.15■□□□□ 0.18
TRIM56-202ENST00000412507 OR8D4Q8NGM9 314 aa16.15■□□□□ 0.18
TRIM56-202ENST00000412507 PIMREGQ9BSJ6 248 aa16.15■□□□□ 0.18
TRIM56-202ENST00000412507 CADM1Q9BY67 442 aaKnown RBP16.15■□□□□ 0.18
TRIM56-202ENST00000412507 MS4A5Q9H3V2 200 aa16.15■□□□□ 0.18
TRIM56-202ENST00000412507 MYOZ1Q9NP98 299 aaPredicted RBP16.15■□□□□ 0.18
TRIM56-202ENST00000412507 RPRD1BQ9NQG5 326 aaKnown RBP16.15■□□□□ 0.18
TRIM56-202ENST00000412507 IL20Q9NYY1 176 aa16.15■□□□□ 0.18
TRIM56-202ENST00000412507 TAAR3PQ9P1P4 343 aa16.15■□□□□ 0.18
TRIM56-202ENST00000412507 ASH2LQ9UBL3 628 aa16.15■□□□□ 0.18
TRIM56-202ENST00000412507 POMPQ9Y244 141 aa16.15■□□□□ 0.18
TRIM56-202ENST00000412507 IGLV3-9A0A075B6K5 115 aa16.14■□□□□ 0.17
TRIM56-202ENST00000412507 LOC390937A0A1W2PQ73 354 aa16.14■□□□□ 0.17
TRIM56-202ENST00000412507 OR6C68A6NDL8 312 aa16.14■□□□□ 0.17
TRIM56-202ENST00000412507 VWC2LB2RUY7 222 aa16.14■□□□□ 0.17
TRIM56-202ENST00000412507 NDUFS8O00217 210 aa16.14■□□□□ 0.17
TRIM56-202ENST00000412507 BHLHE40O14503 412 aa16.14■□□□□ 0.17
TRIM56-202ENST00000412507 GSC2O15499 205 aa16.14■□□□□ 0.17
TRIM56-202ENST00000412507 GAAP10253 952 aa16.14■□□□□ 0.17
TRIM56-202ENST00000412507 NAT2P11245 290 aa16.14■□□□□ 0.17
TRIM56-202ENST00000412507 HTR5AP47898 357 aa16.14■□□□□ 0.17
TRIM56-202ENST00000412507 ERFP50548 548 aa16.14■□□□□ 0.17
TRIM56-202ENST00000412507 SELENOVP59797 346 aa16.14■□□□□ 0.17
TRIM56-202ENST00000412507 LOXL1Q08397 574 aaPredicted RBP16.14■□□□□ 0.17
TRIM56-202ENST00000412507 KCNMB1Q16558 191 aa16.14■□□□□ 0.17
TRIM56-202ENST00000412507 NKPD1Q17RQ9 610 aa16.14■□□□□ 0.17
TRIM56-202ENST00000412507 RFPL4BQ6ZWI9 263 aa16.14■□□□□ 0.17
TRIM56-202ENST00000412507 VASH1Q7L8A9 365 aaPredicted RBP16.14■□□□□ 0.17
TRIM56-202ENST00000412507 DGCR6LQ9BY27 220 aa16.14■□□□□ 0.17
TRIM56-202ENST00000412507 TBC1D23Q9NUY8 699 aa16.14■□□□□ 0.17
TRIM56-202ENST00000412507 PLEK2Q9NYT0 353 aa16.14■□□□□ 0.17
TRIM56-202ENST00000412507 NDRG4Q9ULP0 352 aaKnown RBP16.14■□□□□ 0.17
TRIM56-202ENST00000412507 TANC2Q9HCD6 1990 aa16.14■□□□□ 0.17
TRIM56-202ENST00000412507 LYNX1G3V0Z9 82 aa16.13■□□□□ 0.17
TRIM56-202ENST00000412507 SOX14O95416 240 aa16.13■□□□□ 0.17
TRIM56-202ENST00000412507 NGFP01138 241 aa16.13■□□□□ 0.17
TRIM56-202ENST00000412507 TP53P04637 393 aaPredicted RBP16.13■□□□□ 0.17
TRIM56-202ENST00000412507 LYNX1P0DP58 116 aa16.13■□□□□ 0.17
TRIM56-202ENST00000412507 COX5BP10606 129 aa16.13■□□□□ 0.17
TRIM56-202ENST00000412507 ZNF718Q3SXZ3 478 aa16.13■□□□□ 0.17
TRIM56-202ENST00000412507 TMEM179BQ7Z7N9 219 aa16.13■□□□□ 0.17
TRIM56-202ENST00000412507 NPEPL1Q8NDH3 523 aa16.13■□□□□ 0.17
TRIM56-202ENST00000412507 OR10G2Q8NGC3 310 aa16.13■□□□□ 0.17
TRIM56-202ENST00000412507 ABHD4Q8TB40 342 aa16.13■□□□□ 0.17
TRIM56-202ENST00000412507 SLC25A40Q8TBP6 338 aa16.13■□□□□ 0.17
TRIM56-202ENST00000412507 UBASH3BQ8TF42 649 aa16.13■□□□□ 0.17
TRIM56-202ENST00000412507 GIPC3Q8TF64 312 aa16.13■□□□□ 0.17
TRIM56-202ENST00000412507 MARS2Q96GW9 593 aaKnown RBP16.13■□□□□ 0.17
TRIM56-202ENST00000412507 POM121Q96HA1 1249 aa16.13■□□□□ 0.17
TRIM56-202ENST00000412507 C4orf45Q96LM5 186 aa16.13■□□□□ 0.17
TRIM56-202ENST00000412507 TSSK6Q9BXA6 273 aa16.13■□□□□ 0.17
TRIM56-202ENST00000412507 RACGAP1Q9H0H5 632 aa16.13■□□□□ 0.17
TRIM56-202ENST00000412507 POLR1DQ9Y2S0 133 aa16.13■□□□□ 0.17
TRIM56-202ENST00000412507 INAFM1C9JVW0 142 aa16.12■□□□□ 0.17
TRIM56-202ENST00000412507 GNGT2O14610 69 aa16.12■□□□□ 0.17
TRIM56-202ENST00000412507 HPXP02790 462 aa16.12■□□□□ 0.17
TRIM56-202ENST00000412507 GSTM3P21266 225 aa16.12■□□□□ 0.17
TRIM56-202ENST00000412507 USF1P22415 310 aaPredicted RBP16.12■□□□□ 0.17
TRIM56-202ENST00000412507 MPV17P39210 176 aa16.12■□□□□ 0.17
TRIM56-202ENST00000412507 NR4A2P43354 598 aa16.12■□□□□ 0.17
TRIM56-202ENST00000412507 PPP1CBP62140 327 aa16.12■□□□□ 0.17
TRIM56-202ENST00000412507 GLO1Q04760 184 aa16.12■□□□□ 0.17
TRIM56-202ENST00000412507 GGTLC2Q14390 218 aa16.12■□□□□ 0.17
TRIM56-202ENST00000412507 TMEM249Q2WGJ8 235 aa16.12■□□□□ 0.17
TRIM56-202ENST00000412507 CCDC92Q53HC0 331 aaPredicted RBP16.12■□□□□ 0.17
TRIM56-202ENST00000412507 UNQ6126/PRO20091Q6UXV3 157 aa16.12■□□□□ 0.17
TRIM56-202ENST00000412507 ZBTB46Q86UZ6 589 aa16.12■□□□□ 0.17
TRIM56-202ENST00000412507 ZNF786Q8N393 782 aa16.12■□□□□ 0.17
TRIM56-202ENST00000412507 CYB561A3Q8NBI2 242 aa16.12■□□□□ 0.17
TRIM56-202ENST00000412507 SLC26A10Q8NG04 563 aa16.12■□□□□ 0.17
TRIM56-202ENST00000412507 SLC7A6Q92536 515 aa16.12■□□□□ 0.17
TRIM56-202ENST00000412507 NIPSNAP1Q9BPW8 284 aa16.12■□□□□ 0.17
TRIM56-202ENST00000412507 OR2J1Q9GZK6 312 aa16.12■□□□□ 0.17
TRIM56-202ENST00000412507 ELOVL3Q9HB03 270 aa16.12■□□□□ 0.17
TRIM56-202ENST00000412507 SLCO1C1Q9NYB5 712 aa16.12■□□□□ 0.17
TRIM56-202ENST00000412507 GPR160Q9UJ42 338 aa16.12■□□□□ 0.17
TRIM56-202ENST00000412507 LHFPL6Q9Y693 200 aa16.12■□□□□ 0.17
TRIM56-202ENST00000412507 DYSFO75923 2080 aa16.12■□□□□ 0.17
TRIM56-202ENST00000412507 TCRBV3S1A0A5B6 114 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms