RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 FN3KQ9H479 309 aa16.27■□□□□ 0.2
SF3A1-202ENST00000411423 EGLN3Q9H6Z9 239 aa16.27■□□□□ 0.2
SF3A1-202ENST00000411423 KRCC1Q9NPI7 259 aaPredicted RBP16.27■□□□□ 0.2
SF3A1-202ENST00000411423 HINT3Q9NQE9 182 aaKnown RBP16.27■□□□□ 0.2
SF3A1-202ENST00000411423 FBN1P35555 2871 aaKnown RBP16.26■□□□□ 0.19
SF3A1-202ENST00000411423 WNT9BO14905 357 aa16.26■□□□□ 0.19
SF3A1-202ENST00000411423 RP2O75695 350 aa16.26■□□□□ 0.19
SF3A1-202ENST00000411423 IGHV3-13P01766 116 aa16.26■□□□□ 0.19
SF3A1-202ENST00000411423 PCBD1P61457 104 aa16.26■□□□□ 0.19
SF3A1-202ENST00000411423 TSPAN31Q12999 210 aa16.26■□□□□ 0.19
SF3A1-202ENST00000411423 TRIM25Q14258 630 aaKnown RBP16.26■□□□□ 0.19
SF3A1-202ENST00000411423 LEG1Q6P5S2 330 aa16.26■□□□□ 0.19
SF3A1-202ENST00000411423 ADCK1Q86TW2 530 aa16.26■□□□□ 0.19
SF3A1-202ENST00000411423 GLB1L2Q8IW92 636 aa16.26■□□□□ 0.19
SF3A1-202ENST00000411423 OR6V1Q8N148 313 aa16.26■□□□□ 0.19
SF3A1-202ENST00000411423 OR8D4Q8NGM9 314 aa16.26■□□□□ 0.19
SF3A1-202ENST00000411423 OR4K13Q8NH42 304 aa16.26■□□□□ 0.19
SF3A1-202ENST00000411423 ABHD4Q8TB40 342 aa16.26■□□□□ 0.19
SF3A1-202ENST00000411423 PLA2G12AQ9BZM1 189 aa16.26■□□□□ 0.19
SF3A1-202ENST00000411423 NDEL1Q9GZM8 345 aa16.26■□□□□ 0.19
SF3A1-202ENST00000411423 TNFRSF11BO00300 401 aa16.25■□□□□ 0.19
SF3A1-202ENST00000411423 ACOT8O14734 319 aa16.25■□□□□ 0.19
SF3A1-202ENST00000411423 ARPC3O15145 178 aa16.25■□□□□ 0.19
SF3A1-202ENST00000411423 DOK2O60496 412 aa16.25■□□□□ 0.19
SF3A1-202ENST00000411423 GASTP01350 101 aa16.25■□□□□ 0.19
SF3A1-202ENST00000411423 IGFBP5P24593 272 aa16.25■□□□□ 0.19
SF3A1-202ENST00000411423 SLC6A6P31641 620 aa16.25■□□□□ 0.19
SF3A1-202ENST00000411423 GUCA1AP43080 201 aaPredicted RBP16.25■□□□□ 0.19
SF3A1-202ENST00000411423 MMP15P51511 669 aa16.25■□□□□ 0.19
SF3A1-202ENST00000411423 PPP1CBP62140 327 aa16.25■□□□□ 0.19
SF3A1-202ENST00000411423 CCL8P80075 99 aa16.25■□□□□ 0.19
SF3A1-202ENST00000411423 KCNMB1Q16558 191 aa16.25■□□□□ 0.19
SF3A1-202ENST00000411423 SPRNQ5BIV9 151 aa16.25■□□□□ 0.19
SF3A1-202ENST00000411423 DHFR2Q86XF0 187 aa16.25■□□□□ 0.19
SF3A1-202ENST00000411423 ARHGAP24Q8N264 748 aa16.25■□□□□ 0.19
SF3A1-202ENST00000411423 SDR9C7Q8NEX9 313 aa16.25■□□□□ 0.19
SF3A1-202ENST00000411423 KLF14Q8TD94 323 aaPredicted RBP16.25■□□□□ 0.19
SF3A1-202ENST00000411423 C4orf45Q96LM5 186 aa16.25■□□□□ 0.19
SF3A1-202ENST00000411423 SNX18Q96RF0 628 aa16.25■□□□□ 0.19
SF3A1-202ENST00000411423 ZNF275Q9NSD4 429 aaPredicted RBP16.25■□□□□ 0.19
SF3A1-202ENST00000411423 ASH2LQ9UBL3 628 aa16.25■□□□□ 0.19
SF3A1-202ENST00000411423 TMCC3Q9ULS5 477 aa16.25■□□□□ 0.19
SF3A1-202ENST00000411423 B9D1Q9UPM9 204 aa16.25■□□□□ 0.19
SF3A1-202ENST00000411423 MALRD1Q5VYJ5 2156 aa16.25■□□□□ 0.19
SF3A1-202ENST00000411423 JMJD1CQ15652 2540 aa16.24■□□□□ 0.19
SF3A1-202ENST00000411423 OR6C68A6NDL8 312 aa16.24■□□□□ 0.19
SF3A1-202ENST00000411423 ZSCAN5BA6NJL1 495 aa16.24■□□□□ 0.19
SF3A1-202ENST00000411423 RER1O15258 196 aa16.24■□□□□ 0.19
SF3A1-202ENST00000411423 SGCEO43556 437 aa16.24■□□□□ 0.19
SF3A1-202ENST00000411423 DBHP09172 617 aa16.24■□□□□ 0.19
SF3A1-202ENST00000411423 COX5BP10606 129 aa16.24■□□□□ 0.19
SF3A1-202ENST00000411423 RBMXP38159 391 aaKnown RBP16.24■□□□□ 0.19
SF3A1-202ENST00000411423 HTR5AP47898 357 aa16.24■□□□□ 0.19
SF3A1-202ENST00000411423 GZMKP49863 264 aa16.24■□□□□ 0.19
SF3A1-202ENST00000411423 LSM6P62312 80 aaKnown RBP16.24■□□□□ 0.19
SF3A1-202ENST00000411423 AQP6Q13520 282 aa16.24■□□□□ 0.19
SF3A1-202ENST00000411423 MTX3Q5HYI7 312 aa16.24■□□□□ 0.19
SF3A1-202ENST00000411423 SLC35F1Q5T1Q4 408 aa16.24■□□□□ 0.19
SF3A1-202ENST00000411423 MBNL2Q5VZF2 373 aaKnown RBP16.24■□□□□ 0.19
SF3A1-202ENST00000411423 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.24■□□□□ 0.19
SF3A1-202ENST00000411423 ALDH16A1Q8IZ83 802 aa16.24■□□□□ 0.19
SF3A1-202ENST00000411423 ZNRF4Q8WWF5 429 aa16.24■□□□□ 0.19
SF3A1-202ENST00000411423 RDH5Q92781 318 aa16.24■□□□□ 0.19
SF3A1-202ENST00000411423 CCDC124Q96CT7 223 aaKnown RBP16.24■□□□□ 0.19
SF3A1-202ENST00000411423 DDOQ99489 341 aa16.24■□□□□ 0.19
SF3A1-202ENST00000411423 IFT27Q9BW83 186 aa16.24■□□□□ 0.19
SF3A1-202ENST00000411423 MAGIXQ9H6Y5 334 aa16.24■□□□□ 0.19
SF3A1-202ENST00000411423 SRA1Q9HD15 236 aaKnown RBP16.24■□□□□ 0.19
SF3A1-202ENST00000411423 SLCO1C1Q9NYB5 712 aa16.24■□□□□ 0.19
SF3A1-202ENST00000411423 EIF3KQ9UBQ5 218 aaKnown RBP16.24■□□□□ 0.19
SF3A1-202ENST00000411423 PRPF19Q9UMS4 504 aaKnown RBP16.24■□□□□ 0.19
SF3A1-202ENST00000411423 LHFPL6Q9Y693 200 aa16.24■□□□□ 0.19
SF3A1-202ENST00000411423 CACNG2Q9Y698 323 aa16.24■□□□□ 0.19
SF3A1-202ENST00000411423 OR6C6A6NF89 314 aa16.23■□□□□ 0.19
SF3A1-202ENST00000411423 KRT36O76013 467 aa16.23■□□□□ 0.19
SF3A1-202ENST00000411423 IGHV1-46P01743 117 aa16.23■□□□□ 0.19
SF3A1-202ENST00000411423 TFP02787 698 aa16.23■□□□□ 0.19
SF3A1-202ENST00000411423 ACHEP22303 614 aa16.23■□□□□ 0.19
SF3A1-202ENST00000411423 ERFP50548 548 aa16.23■□□□□ 0.19
SF3A1-202ENST00000411423 SCRN3Q0VDG4 424 aa16.23■□□□□ 0.19
SF3A1-202ENST00000411423 TSTQ16762 297 aaKnown RBP16.23■□□□□ 0.19
SF3A1-202ENST00000411423 ZNF718Q3SXZ3 478 aa16.23■□□□□ 0.19
SF3A1-202ENST00000411423 CLEC12AQ5QGZ9 265 aa16.23■□□□□ 0.19
SF3A1-202ENST00000411423 ZNF362Q5T0B9 420 aaPredicted RBP16.23■□□□□ 0.19
SF3A1-202ENST00000411423 CORO6Q6QEF8 472 aa16.23■□□□□ 0.19
SF3A1-202ENST00000411423 IL17RELQ6ZVW7 336 aa16.23■□□□□ 0.19
SF3A1-202ENST00000411423 ZNF540Q8NDQ6 660 aa16.23■□□□□ 0.19
SF3A1-202ENST00000411423 MDFIQ99750 246 aa16.23■□□□□ 0.19
SF3A1-202ENST00000411423 WACQ9BTA9 647 aa16.23■□□□□ 0.19
SF3A1-202ENST00000411423 TRIM15Q9C019 465 aa16.23■□□□□ 0.19
SF3A1-202ENST00000411423 RACGAP1Q9H0H5 632 aa16.23■□□□□ 0.19
SF3A1-202ENST00000411423 C1orf21Q9H246 121 aa16.23■□□□□ 0.19
SF3A1-202ENST00000411423 MUC13Q9H3R2 512 aa16.23■□□□□ 0.19
SF3A1-202ENST00000411423 CHODLQ9H9P2 273 aa16.23■□□□□ 0.19
SF3A1-202ENST00000411423 RPRD1BQ9NQG5 326 aaKnown RBP16.23■□□□□ 0.19
SF3A1-202ENST00000411423 U3KQV3 271 aa16.23■□□□□ 0.19
SF3A1-202ENST00000411423 LOC100289279A0A1B0GTE1 492 aa16.22■□□□□ 0.19
SF3A1-202ENST00000411423 BHLHE40O14503 412 aa16.22■□□□□ 0.19
SF3A1-202ENST00000411423 LMX1BO60663 402 aa16.22■□□□□ 0.19
SF3A1-202ENST00000411423 CDC14BO60729 498 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms