RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 SPTBP11277 2137 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 ZBTB25P24278 435 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 EIF1AXP47813 144 aaKnown RBP13.92□□□□□ -0.18
LIMS2-205ENST00000409455 STARD6P59095 220 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 RPS4XP62701 263 aaKnown RBP13.92□□□□□ -0.18
LIMS2-205ENST00000409455 CXADRP78310 365 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 IL13RA1P78552 427 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 NAAAQ02083 359 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 PJVKQ0ZLH3 352 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 HYAL4Q2M3T9 481 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 TMEM200AQ86VY9 491 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 OR6N2Q8NGY6 317 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 NT5CQ8TCD5 201 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 TMED6Q8WW62 240 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 DCUN1D4Q92564 292 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 GPX7Q96SL4 187 aaPredicted RBP13.92□□□□□ -0.18
LIMS2-205ENST00000409455 PRRT1Q99946 306 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 GAL3ST1Q99999 423 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 SEMA6CQ9H3T2 930 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 NIT2Q9NQR4 276 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 WNT16Q9UBV4 365 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 ZNF107Q9UII5 783 aaPredicted RBP13.92□□□□□ -0.18
LIMS2-205ENST00000409455 LHX6Q9UPM6 363 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 A0A087WUJ7 227 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 IGHV1OR15-9A0A0B4J2B8 117 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 C4orf47A7E2U8 309 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 BLOC1S5-TXNDC5H3BN57 136 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 YKT6O15498 198 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 ZNF28P17035 718 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 ZNF10P21506 573 aaPredicted RBP13.92□□□□□ -0.18
LIMS2-205ENST00000409455 MAP3K8P41279 467 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 EGR3Q06889 387 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 PPP1R1AQ13522 171 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 HABP2Q14520 560 aaPredicted RBP13.92□□□□□ -0.18
LIMS2-205ENST00000409455 MEF2DQ14814 521 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 GFOD2Q3B7J2 385 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 PAPD4Q6PIY7 484 aaKnown RBP13.92□□□□□ -0.18
LIMS2-205ENST00000409455 ABHD13Q7L211 337 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 SLC25A42Q86VD7 318 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 PRSS35Q8N3Z0 413 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 OR10R2Q8NGX6 335 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 MITD1Q8WV92 249 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 LCN9Q8WX39 176 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 CPNE2Q96FN4 548 aaPredicted RBP13.92□□□□□ -0.18
LIMS2-205ENST00000409455 SLC6A7Q99884 636 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 NRIP2Q9BQI9 281 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 KIR3DX1Q9H7L2 352 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 RNF122Q9H9V4 155 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 SRA1Q9HD15 236 aaKnown RBP13.92□□□□□ -0.18
LIMS2-205ENST00000409455 RCC2Q9P258 522 aaKnown RBP13.92□□□□□ -0.18
LIMS2-205ENST00000409455 VSIG4Q9Y279 399 aa13.92□□□□□ -0.18
LIMS2-205ENST00000409455 TEX13DA0A0J9YY54 714 aaPredicted RBP13.91□□□□□ -0.18
LIMS2-205ENST00000409455 A0A1W2PPC4 97 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 A6NCN8 305 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 URADA6NGE7 173 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 TVP23AA6NH52 213 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 ZNF860A6NHJ4 632 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 C1orf196B1AJZ1 125 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 EEF1E1-BLOC1S5C9J1V9 151 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 KCNAB3O43448 404 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 SSX5O60225 188 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 FGF17O60258 216 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 ZNF217O75362 1048 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 THEGLP0DJG4 465 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 PTAFRP25105 342 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 AQP2P41181 271 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 PRICKLE4Q2TBC4 344 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 ZNF584Q8IVC4 421 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 DEFB123Q8N688 67 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 PLPP7Q8NBV4 271 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 DCBLD2Q96PD2 775 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 TCEAL7Q9BRU2 100 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 CHMP1AQ9HD42 196 aaPredicted RBP13.91□□□□□ -0.18
LIMS2-205ENST00000409455 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.91□□□□□ -0.18
LIMS2-205ENST00000409455 DHCR7Q9UBM7 475 aaKnown RBP13.91□□□□□ -0.18
LIMS2-205ENST00000409455 LOC100509620A0A075B734 347 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 EIF1BO60739 113 aaKnown RBP13.91□□□□□ -0.18
LIMS2-205ENST00000409455 TNFP01375 233 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 PSMB6P28072 239 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 TACR3P29371 465 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 EIF1P41567 113 aaKnown RBP13.91□□□□□ -0.18
LIMS2-205ENST00000409455 GRK6P43250 576 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 SKP1P63208 163 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 NKPD1Q17RQ9 610 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 PNLIPRP3Q17RR3 467 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 RBMS3Q6XE24 437 aaKnown RBP13.91□□□□□ -0.18
LIMS2-205ENST00000409455 MISPQ8IVT2 679 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 C4orf45Q96LM5 186 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 SCN2AQ99250 2005 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 SELENOIQ9C0D9 397 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 CST11Q9H112 138 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 WDR76Q9H967 626 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 SMCO4Q9NRQ5 59 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 TMEM74BQ9NUR3 256 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 CSAG2Q9Y5P2 127 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 TMEM14AQ9Y6G1 99 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 SPACA6W5XKT8 324 aa13.91□□□□□ -0.18
LIMS2-205ENST00000409455 NUP210LQ5VU65 1888 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 A0A0B4J2A0 478 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 SPTY2D1-AS1A0A0U1RR47 76 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms