RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 ATXN7L1Q9ULK2 861 aaPredicted RBP9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 OR51B4Q9Y5P0 310 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 A0A087WWC5 75 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 IGHV1OR15-9A0A0B4J2B8 117 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 TRBV5-5A0A0J9YX44 114 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 A0A1W2PPH5 198 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 CXorf65A6NEN9 183 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 A8MWP6 167 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 SYT7O43581 403 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 DOK2O60496 412 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 LRP3O75074 770 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 TGFB1P01137 390 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 GAPDHP04406 335 aaKnown RBP9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 FBXO45P0C2W1 286 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 ZNF735P0CB33 412 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 CD37P11049 281 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 RPS2P15880 293 aaKnown RBP9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 ADH7P40394 386 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 DHPSP49366 369 aaPredicted RBP9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 FXYD6P3P58550 94 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 OR2B8PP59922 312 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 FUT5Q11128 374 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 CLN3Q13286 438 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 SKP2Q13309 424 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 MESTQ5EB52 335 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 NCMAPQ5T1S8 102 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 RPTNQ6XPR3 784 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 ZNF574Q6ZN55 896 aaPredicted RBP9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 FRRS1Q6ZNA5 592 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 SSX6Q7RTT6 188 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 TGIF2LXQ8IUE1 241 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 C9orf40Q8IXQ3 194 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 UBAC2Q8NBM4 344 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 ASB17Q8WXJ9 295 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 ZNF775Q96BV0 537 aaPredicted RBP9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 LOXL4Q96JB6 756 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 RHOVQ96L33 236 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 PHB2Q99623 299 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 HCAR1Q9BXC0 346 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 SLC5A10A0PJK1 596 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 LNP1A1A4G5 178 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 DCDC2BA2VCK2 349 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 CDC42EP2O14613 210 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 DVL1O14640 695 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 PIP5K1CO60331 668 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 OR10H2O60403 315 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 CTAG2O75638 210 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 DUS4LO95620 317 aaKnown RBP9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 RAB3DO95716 219 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 SLC16A8O95907 504 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 RPN2P04844 631 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 PGAM2P15259 253 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 NME1P15531 152 aaKnown RBP9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 EDNRAP25101 427 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 TACR3P29371 465 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 PCP4P48539 62 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 HNRNPKP61978 463 aaKnown RBP eCLIP9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 LSM6P62312 80 aaKnown RBP9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 CRMP1Q14194 572 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 RSU1Q15404 277 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 PRAMEF17Q5VTA0 474 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 ADAM5Q6NVV9 412 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 FIGNL1Q6PIW4 674 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 CRTC1Q6UUV9 634 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 DPPA4Q7L190 304 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 ZNF227Q86WZ6 799 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 DCAF4L2Q8NA75 395 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 OR56A1Q8NGH5 318 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 OR5AK2Q8NH90 309 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 FIBINQ8TAL6 211 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 TMED6Q8WW62 240 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 HPSE2Q8WWQ2 592 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 OR8D1Q8WZ84 308 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 SPACA7Q96KW9 195 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 PRRT1Q99946 306 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 RSRP1Q9BUV0 290 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 RNF126Q9BV68 326 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 RGCCQ9H4X1 137 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 TMEM231Q9H6L2 316 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 FSCN3Q9NQT6 498 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 POT1Q9NUX5 634 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 ASF1AQ9Y294 204 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 NOP16Q9Y3C1 178 aaKnown RBP9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 PCDH15Q96QU1 1955 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 FREM2Q5SZK8 3169 aa9.6□□□□□ -0.87
NIF3L1-204ENST00000409357 CELSR3Q9NYQ7 3312 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 MAP1BP46821 2468 aaKnown RBP9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 TRBV5-7A0A0A0MS05 114 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 HSPB2A8KAH6 182 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 ZZEF1O43149 2961 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 THY1P04216 161 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 CD3DP04234 171 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 BSGP35613 385 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 SULT1A1P50225 295 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 RPS15P62841 145 aaKnown RBP9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 TNFRSF9Q07011 255 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 HSPB2Q16082 182 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 Q499Y3 187 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 FNDC3BQ53EP0 1204 aaKnown RBP9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 KRBOX4Q5JUW0 171 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms