RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 ENTPD2Q9Y5L3 495 aa12.78□□□□□ -0.36
AFF3-202ENST00000409236 M0QYG6 137 aa12.78□□□□□ -0.36
AFF3-202ENST00000409236 WDR1O75083 606 aa12.78□□□□□ -0.36
AFF3-202ENST00000409236 CSO75390 466 aaKnown RBP12.78□□□□□ -0.36
AFF3-202ENST00000409236 SOWAHCQ53LP3 525 aaPredicted RBP12.78□□□□□ -0.36
AFF3-202ENST00000409236 PEBP4Q96S96 227 aa12.78□□□□□ -0.36
AFF3-202ENST00000409236 FGFBP2Q9BYJ0 223 aa12.78□□□□□ -0.36
AFF3-202ENST00000409236 PSORS1C1Q9UIG5 152 aa12.78□□□□□ -0.36
AFF3-202ENST00000409236 GABRR3A8MPY1 467 aa12.78□□□□□ -0.36
AFF3-202ENST00000409236 M0QZ24 198 aa12.78□□□□□ -0.36
AFF3-202ENST00000409236 MAN2B1O00754 1011 aa12.78□□□□□ -0.36
AFF3-202ENST00000409236 OR5G3P0C626 314 aa12.78□□□□□ -0.36
AFF3-202ENST00000409236 ALKBH1Q13686 389 aaKnown RBP12.78□□□□□ -0.36
AFF3-202ENST00000409236 RABEPKQ7Z6M1 372 aa12.78□□□□□ -0.36
AFF3-202ENST00000409236 OR52R1Q8NGF1 315 aa12.78□□□□□ -0.36
AFF3-202ENST00000409236 ALOXE3Q9BYJ1 711 aa12.78□□□□□ -0.36
AFF3-202ENST00000409236 FZD1Q9UP38 647 aa12.78□□□□□ -0.36
AFF3-202ENST00000409236 AQP8O94778 261 aa12.77□□□□□ -0.36
AFF3-202ENST00000409236 LYSMD4Q5XG99 296 aa12.77□□□□□ -0.36
AFF3-202ENST00000409236 CLMPQ9H6B4 373 aa12.77□□□□□ -0.36
AFF3-202ENST00000409236 VDAC3Q9Y277 283 aa12.77□□□□□ -0.36
AFF3-202ENST00000409236 MON2Q7Z3U7 1717 aa12.77□□□□□ -0.36
AFF3-202ENST00000409236 FCN1O00602 326 aa12.77□□□□□ -0.36
AFF3-202ENST00000409236 IGHEP01854 428 aa12.77□□□□□ -0.36
AFF3-202ENST00000409236 MMP15P51511 669 aa12.77□□□□□ -0.36
AFF3-202ENST00000409236 DHODHQ02127 395 aa12.77□□□□□ -0.36
AFF3-202ENST00000409236 MED1Q15648 1581 aaPredicted RBP12.77□□□□□ -0.36
AFF3-202ENST00000409236 ZNF628Q5EBL2 1059 aa12.77□□□□□ -0.36
AFF3-202ENST00000409236 SYT9Q86SS6 491 aa12.77□□□□□ -0.36
AFF3-202ENST00000409236 TMEM191AQ9H0A3 160 aa12.77□□□□□ -0.36
AFF3-202ENST00000409236 PARP12Q9H0J9 701 aaKnown RBP12.77□□□□□ -0.36
AFF3-202ENST00000409236 TTRP02766 147 aa12.77□□□□□ -0.36
AFF3-202ENST00000409236 RPL17P18621 184 aaKnown RBP12.77□□□□□ -0.36
AFF3-202ENST00000409236 INPP5JQ15735 1006 aaPredicted RBP12.77□□□□□ -0.36
AFF3-202ENST00000409236 SLC35A4Q96G79 324 aa12.77□□□□□ -0.36
AFF3-202ENST00000409236 ZNF778Q96MU6 729 aa12.77□□□□□ -0.36
AFF3-202ENST00000409236 ZFYVE21Q9BQ24 234 aa12.77□□□□□ -0.36
AFF3-202ENST00000409236 SLC35B3Q9H1N7 401 aa12.77□□□□□ -0.36
AFF3-202ENST00000409236 LMX1BO60663 402 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 ITGB7P26010 798 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 DOC2BQ14184 412 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 TMEM184AQ6ZMB5 413 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 ZNF813Q6ZN06 617 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 DND1Q8IYX4 353 aaKnown RBP12.77□□□□□ -0.37
AFF3-202ENST00000409236 CHST14Q8NCH0 376 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 HRASLS5Q96KN8 279 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 EXOSC2Q13868 293 aaKnown RBP12.77□□□□□ -0.37
AFF3-202ENST00000409236 KIR2DS3Q14952 304 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 COX19Q49B96 90 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 DACT2Q5SW24 774 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 TDRD15B5MCY1 1934 aaKnown RBP12.77□□□□□ -0.37
AFF3-202ENST00000409236 CACNA1IQ9P0X4 2223 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 PEX10O60683 326 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 CXCL9Q07325 125 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 SSX1Q16384 188 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 TXNDC8Q6A555 127 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 OR2A14Q96R47 310 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 PRAMEF25A6NGN4 478 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 PRAMEF5Q5TYX0 476 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 PRAMEF6Q5VXH4 476 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 TUSC5Q8IXB3 177 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 RAB37Q96AX2 223 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 ANAPC16Q96DE5 110 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 NXT1Q9UKK6 140 aaKnown RBP12.77□□□□□ -0.37
AFF3-202ENST00000409236 NWD2Q9ULI1 1742 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 AP4M1O00189 453 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 CCSO14618 274 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 ARSDP51689 593 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 DRAM2Q6UX65 266 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 DOLPP1Q86YN1 238 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 OR4S1Q8NGB4 309 aa12.77□□□□□ -0.37
AFF3-202ENST00000409236 TRAV34A0A0B4J273 112 aa12.76□□□□□ -0.37
AFF3-202ENST00000409236 ACOD1A6NK06 481 aa12.76□□□□□ -0.37
AFF3-202ENST00000409236 DUS4LO95620 317 aaKnown RBP12.76□□□□□ -0.37
AFF3-202ENST00000409236 EIF1P41567 113 aaKnown RBP12.76□□□□□ -0.37
AFF3-202ENST00000409236 FPGSQ05932 587 aa12.76□□□□□ -0.37
AFF3-202ENST00000409236 SRSF9Q13242 221 aaKnown RBP eCLIP12.76□□□□□ -0.37
AFF3-202ENST00000409236 LTC4SQ16873 150 aa12.76□□□□□ -0.37
AFF3-202ENST00000409236 ZNF738Q8NE65 137 aa12.76□□□□□ -0.37
AFF3-202ENST00000409236 HTR1DP28221 377 aa12.76□□□□□ -0.37
AFF3-202ENST00000409236 TAAR6Q96RI8 345 aa12.76□□□□□ -0.37
AFF3-202ENST00000409236 OR2AK2Q8NG84 335 aa12.76□□□□□ -0.37
AFF3-202ENST00000409236 PRSS3P2Q8NHM4 247 aa12.76□□□□□ -0.37
AFF3-202ENST00000409236 JAM3Q9BX67 310 aa12.76□□□□□ -0.37
AFF3-202ENST00000409236 RHOFQ9HBH0 211 aa12.76□□□□□ -0.37
AFF3-202ENST00000409236 IGSF5Q9NSI5 407 aa12.76□□□□□ -0.37
AFF3-202ENST00000409236 MARCH4Q9P2E8 410 aaPredicted RBP12.76□□□□□ -0.37
AFF3-202ENST00000409236 CSF2RBP32927 897 aa12.76□□□□□ -0.37
AFF3-202ENST00000409236 OLIG2Q13516 323 aa12.76□□□□□ -0.37
AFF3-202ENST00000409236 MFSD4AQ8N468 514 aa12.76□□□□□ -0.37
AFF3-202ENST00000409236 PQLC3Q8N755 202 aa12.76□□□□□ -0.37
AFF3-202ENST00000409236 EXD3Q8N9H8 876 aa12.76□□□□□ -0.37
AFF3-202ENST00000409236 RXFP4Q8TDU9 374 aa12.76□□□□□ -0.37
AFF3-202ENST00000409236 CMBLQ96DG6 245 aa12.76□□□□□ -0.37
AFF3-202ENST00000409236 A0A0J9YY10 115 aa12.76□□□□□ -0.37
AFF3-202ENST00000409236 BMP5P22003 454 aa12.76□□□□□ -0.37
AFF3-202ENST00000409236 INHBCP55103 352 aa12.76□□□□□ -0.37
AFF3-202ENST00000409236 PJVKQ0ZLH3 352 aa12.76□□□□□ -0.37
AFF3-202ENST00000409236 TCRBV21S2A2A0A5A6 115 aa12.76□□□□□ -0.37
AFF3-202ENST00000409236 LGI1O95970 557 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 267.6 ms