RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 MTCP1P56278 107 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 DCAF7P61962 342 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 HNRNPKP61978 463 aaKnown RBP eCLIP16.13■□□□□ 0.17
SMPD4-202ENST00000409031 DBX2Q6ZNG2 339 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 NUDCD2Q8WVJ2 157 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 MS4A6EQ96DS6 147 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 SDSLQ96GA7 329 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 GDF2Q9UK05 429 aaPredicted RBP16.13■□□□□ 0.17
SMPD4-202ENST00000409031 LOC107986453A0A1B0GWG9 222 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 PEX12O00623 359 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 NMBP08949 121 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 G0S2P27469 103 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 FASLGP48023 281 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 ZNF133P52736 654 aaPredicted RBP16.13■□□□□ 0.17
SMPD4-202ENST00000409031 TESK1Q15569 626 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 MRM1Q6IN84 353 aaKnown RBP16.13■□□□□ 0.17
SMPD4-202ENST00000409031 VPS25Q9BRG1 176 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 JAM3Q9BX67 310 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 V9GYS6 101 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 ZFC3H1O60293 1989 aaKnown RBP16.13■□□□□ 0.17
SMPD4-202ENST00000409031 OR5K3A6NET4 321 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 SLC35E2P0CK97 266 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 SPP1P10451 314 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 FABP4P15090 132 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 ABCD3P28288 659 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 GUCA2AQ02747 115 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 RNF151Q2KHN1 245 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 DTWD2Q8NBA8 298 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 LMX1AQ8TE12 382 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 CCDC85CA6NKD9 419 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 H0YGG7 62 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 TRAPPC6AO75865 159 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 C21orf58P58505 322 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 HHEXQ03014 270 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 IL10RAQ13651 578 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 FAM209BQ5JX69 171 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 ZNF595Q8IYB9 648 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 BCO1Q9HAY6 547 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 KCND3Q9UK17 655 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 TP53TG5Q9Y2B4 290 aa16.13■□□□□ 0.17
SMPD4-202ENST00000409031 DOT1LQ8TEK3 1739 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 KCNE1BA0A087WTH5 132 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 OR6C68A6NDL8 312 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 EOGTQ5NDL2 527 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 OR5D18Q8NGL1 313 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 PELI1Q96FA3 418 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 CLSTN3Q9BQT9 956 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 ZNF426Q9BUY5 554 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 TINAGL1Q9GZM7 467 aaPredicted RBP16.12■□□□□ 0.17
SMPD4-202ENST00000409031 FBXO4Q9UKT5 387 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 PADI1Q9ULC6 663 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 KIAA1551Q9HCM1 1747 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 RAB27BO00194 218 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 MPC2O95563 127 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 AADACP22760 399 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 VWA2Q5GFL6 755 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 C9orf152Q5JTZ5 239 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 TMEM31Q5JXX7 168 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 ANKRD9Q96BM1 317 aaPredicted RBP16.12■□□□□ 0.17
SMPD4-202ENST00000409031 ARHGDIGQ99819 225 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 CHRNA9Q9UGM1 479 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 FAM96BQ9Y3D0 163 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 SHROOM3Q8TF72 1996 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 RANP62826 216 aaKnown RBP16.12■□□□□ 0.17
SMPD4-202ENST00000409031 COTL1Q14019 142 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 ARRDC1Q8N5I2 433 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 SLC46A2Q9BY10 475 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 ZNF275Q9NSD4 429 aaPredicted RBP16.12■□□□□ 0.17
SMPD4-202ENST00000409031 WSB2Q9NYS7 404 aaPredicted RBP16.12■□□□□ 0.17
SMPD4-202ENST00000409031 RNF150Q9ULK6 438 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 OR7C1O76099 320 aaPredicted RBP16.12■□□□□ 0.17
SMPD4-202ENST00000409031 PTHLHP12272 177 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 CSNK1A1P48729 337 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 ZNF439Q8NDP4 499 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 SECTM1Q8WVN6 248 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 OR1E3Q8WZA6 343 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 VN1R3Q9BXE9 311 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 GPR160Q9UJ42 338 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 VDAC3Q9Y277 283 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 ECM29Q5VYK3 1845 aa16.12■□□□□ 0.17
SMPD4-202ENST00000409031 KCNJ3P48549 501 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 YBX1P67809 324 aaKnown RBP16.11■□□□□ 0.17
SMPD4-202ENST00000409031 PDLIM3Q53GG5 364 aaPredicted RBP16.11■□□□□ 0.17
SMPD4-202ENST00000409031 RAET1LQ5VY80 246 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 TSLPQ969D9 159 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 GNG13Q9P2W3 67 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 C17orf112F2Z3M2 114 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 MT-ATP6P00846 226 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 ACRP10323 421 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 BCKDHBP21953 392 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 POLR2HP52434 150 aaKnown RBP16.11■□□□□ 0.17
SMPD4-202ENST00000409031 TAS1R1Q7RTX1 841 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 KCNJ15Q99712 375 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 OR5V1Q9UGF6 321 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 KCNG2Q9UJ96 466 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 MMP24Q9Y5R2 645 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 DOK2O60496 412 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 DBHP09172 617 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 MRPL49Q13405 166 aaKnown RBP16.11■□□□□ 0.17
SMPD4-202ENST00000409031 ENDOGQ14249 297 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms