RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 SPTBN1Q01082 2364 aaKnown RBP11.05□□□□□ -0.64
SMCR8-201ENST00000406438 RBBP6Q7Z6E9 1792 aaKnown RBP11.05□□□□□ -0.64
SMCR8-201ENST00000406438 AKR7A3O95154 331 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 METRNLQ641Q3 311 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 ZNF620Q6ZNG0 422 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 NRARPQ7Z6K4 114 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 ZNF816-ZNF321PA0A0X1KG74 233 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 C5orf49A4QMS7 147 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 SLCO4C1Q6ZQN7 724 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 SLC51BQ86UW2 128 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 RHOXF1Q8NHV9 184 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 RNF24Q9Y225 148 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 M0QYG6 137 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 LGI1O95970 557 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 RBP2P50120 134 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 TEKQ02763 1124 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 SIRT6Q8N6T7 355 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 CLCF1Q9UBD9 225 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 GAB2Q9UQC2 676 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 JTBO76095 146 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 BPIFB3P59826 476 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 ERVFC1P60507 584 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 SMN1Q16637 294 aaKnown RBP11.04□□□□□ -0.64
SMCR8-201ENST00000406438 NRG4Q8WWG1 115 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 FIZ1Q96SL8 496 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 ANK1P16157 1881 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 LAMB2P55268 1798 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 CTDSP2O14595 271 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 CHRM2P08172 466 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 FPR3P25089 353 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 LIM2P55344 173 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 OR10A3P58181 314 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 OR5I1Q13606 314 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 TBPL2Q6SJ96 375 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 ZNF740Q8NDX6 193 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 OR5B3Q8NH48 314 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 ZDHHC16Q969W1 377 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 SLC23A1Q9UHI7 598 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 STMND1H3BQB6 276 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 RPL27P61353 136 aaKnown RBP11.04□□□□□ -0.64
SMCR8-201ENST00000406438 OR5M1Q8NGP8 315 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 OR51F2Q8NH61 342 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 TECTBQ96PL2 329 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 S1PR3Q99500 378 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 CXorf36Q9H7Y0 433 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 ALS2Q96Q42 1657 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 KMT2EQ8IZD2 1858 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 CNMDO75829 334 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 TEAD1P28347 426 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 TMEM64Q6YI46 380 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 NHLRC2Q8NBF2 726 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 FAM71CQ8NEG0 241 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 OR10AD1Q8NGE0 317 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 MARC2Q969Z3 335 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 LYSMD1Q96S90 227 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 ZNF251Q9BRH9 671 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 TRDV1A0A1B0GX56 115 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 PPP6CO00743 305 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 TCRBP04435 133 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 CYC1P08574 325 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 CBR1P16152 277 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 TBXA2RP21731 343 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 CD27P26842 260 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 CCR6P51684 374 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 TAS2R5Q9NYW4 299 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 RNF150Q9ULK6 438 aa11.04□□□□□ -0.64
SMCR8-201ENST00000406438 SOD1P00441 154 aa11.03□□□□□ -0.64
SMCR8-201ENST00000406438 TSEN54Q7Z6J9 526 aaKnown RBP11.03□□□□□ -0.64
SMCR8-201ENST00000406438 DLL4Q9NR61 685 aa11.03□□□□□ -0.64
SMCR8-201ENST00000406438 GMPR2Q9P2T1 348 aaKnown RBP11.03□□□□□ -0.64
SMCR8-201ENST00000406438 CTSFQ9UBX1 484 aa11.03□□□□□ -0.64
SMCR8-201ENST00000406438 IL2RAP01589 272 aa11.03□□□□□ -0.64
SMCR8-201ENST00000406438 H2AFB1P0C5Y9 115 aa11.03□□□□□ -0.64
SMCR8-201ENST00000406438 TRIM23P36406 574 aa11.03□□□□□ -0.64
SMCR8-201ENST00000406438 NKX2-1P43699 371 aaPredicted RBP11.03□□□□□ -0.64
SMCR8-201ENST00000406438 SNRPGP62308 76 aaKnown RBP11.03□□□□□ -0.64
SMCR8-201ENST00000406438 CLN3Q13286 438 aa11.03□□□□□ -0.64
SMCR8-201ENST00000406438 SEH1LQ96EE3 360 aa11.03□□□□□ -0.64
SMCR8-201ENST00000406438 NTNG1Q9Y2I2 539 aa11.03□□□□□ -0.64
SMCR8-201ENST00000406438 CST5P28325 142 aaPredicted RBP11.03□□□□□ -0.64
SMCR8-201ENST00000406438 TPMTP51580 245 aa11.03□□□□□ -0.64
SMCR8-201ENST00000406438 PPIAP62937 165 aaKnown RBP11.03□□□□□ -0.64
SMCR8-201ENST00000406438 OR2AK2Q8NG84 335 aa11.03□□□□□ -0.64
SMCR8-201ENST00000406438 OR51H1Q8NH63 302 aa11.03□□□□□ -0.64
SMCR8-201ENST00000406438 GATA6Q92908 595 aa11.03□□□□□ -0.64
SMCR8-201ENST00000406438 SCPEP1Q9HB40 452 aa11.03□□□□□ -0.64
SMCR8-201ENST00000406438 ARPC3O15145 178 aa11.03□□□□□ -0.64
SMCR8-201ENST00000406438 GALR2O43603 387 aaPredicted RBP11.03□□□□□ -0.64
SMCR8-201ENST00000406438 EIF4E2O60573 245 aaKnown RBP11.03□□□□□ -0.64
SMCR8-201ENST00000406438 MBP02144 154 aa11.03□□□□□ -0.64
SMCR8-201ENST00000406438 ACOT6Q3I5F7 207 aaPredicted RBP11.03□□□□□ -0.64
SMCR8-201ENST00000406438 SLC25A46Q96AG3 418 aa11.03□□□□□ -0.64
SMCR8-201ENST00000406438 BCO1Q9HAY6 547 aa11.03□□□□□ -0.64
SMCR8-201ENST00000406438 LAMP3Q9UQV4 416 aa11.03□□□□□ -0.64
SMCR8-201ENST00000406438 PATJQ8NI35 1801 aa11.03□□□□□ -0.64
SMCR8-201ENST00000406438 FAM166BA8MTA8 275 aa11.03□□□□□ -0.64
SMCR8-201ENST00000406438 M0R1B8 84 aa11.03□□□□□ -0.64
SMCR8-201ENST00000406438 PPP1R2P9O14990 202 aa11.03□□□□□ -0.64
SMCR8-201ENST00000406438 MRPL19P49406 292 aaKnown RBP11.03□□□□□ -0.64
SMCR8-201ENST00000406438 BANF2Q9H503 90 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms