RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 BCO1Q9HAY6 547 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 GPR35Q9HC97 309 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 ASF1BQ9NVP2 202 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 GDF2Q9UK05 429 aaPredicted RBP3.27□□□□□ -1.89
RTN4-208ENST00000404909 FBXL3Q9UKT7 428 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 STUB1Q9UNE7 303 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 SLC5A6Q9Y289 635 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 ZNF175Q9Y473 711 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 UGT2A1Q9Y4X1 527 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 LHFPL6Q9Y693 200 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 SMIM30A4D0T7 59 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 OR14I1A6ND48 311 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 SLC22A1O15245 554 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 SULT1C4O75897 302 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 HLA-DPB1P04440 258 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 H2BFMP0C1H6 154 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 AGTR1P30556 359 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 CRYBB2P43320 205 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 SERPINB10P48595 397 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 GDI2P50395 445 aaKnown RBP3.27□□□□□ -1.89
RTN4-208ENST00000404909 PRKXP51817 358 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 RIDAP52758 137 aaKnown RBP3.27□□□□□ -1.89
RTN4-208ENST00000404909 FOXG1P55316 489 aaPredicted RBP3.27□□□□□ -1.89
RTN4-208ENST00000404909 FABP5Q01469 135 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 BDH1Q02338 343 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 MXD1Q05195 221 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 ACSM1Q08AH1 577 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 INAQ16352 499 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 ACSF3Q4G176 576 aaPredicted RBP3.27□□□□□ -1.89
RTN4-208ENST00000404909 KRTCAP3Q53RY4 240 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 ZNF684Q5T5D7 378 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 RPL22L1Q6P5R6 122 aaKnown RBP3.27□□□□□ -1.89
RTN4-208ENST00000404909 ZNF813Q6ZN06 617 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 KCTD20Q7Z5Y7 419 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 FGD2Q7Z6J4 655 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 RDH10Q8IZV5 341 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 C9orf106Q8NAJ2 232 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 ST7LQ8TDW4 575 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 PPP1R14AQ96A00 147 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 TMEM45BQ96B21 275 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 SLAMF6Q96DU3 332 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 GMPPAQ96IJ6 420 aaPredicted RBP3.27□□□□□ -1.89
RTN4-208ENST00000404909 DCLRE1CQ96SD1 692 aaKnown RBP3.27□□□□□ -1.89
RTN4-208ENST00000404909 FOXB1Q99853 325 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 DCSTAMPQ9H295 470 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 ISYNA1Q9NPH2 558 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 GALNT8Q9NY28 637 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 CLCF1Q9UBD9 225 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 PRSS50Q9UI38 385 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 EMC9Q9Y3B6 208 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 LRP12Q9Y561 859 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 PRR14LQ5THK1 2151 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 DIDO1Q9BTC0 2240 aaKnown RBP3.27□□□□□ -1.89
RTN4-208ENST00000404909 MYO7BQ6PIF6 2116 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 SPTAN1Q13813 2472 aaKnown RBP3.27□□□□□ -1.89
RTN4-208ENST00000404909 ADGRG4Q8IZF6 3080 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 AHRRA9YTQ3 701 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 DVL2O14641 736 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 ZFPL1O95159 310 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 ABHD16AO95870 558 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 HSD11B1P28845 292 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 MAGEB1P43366 347 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 ARF1P84077 181 aaKnown RBP3.26□□□□□ -1.89
RTN4-208ENST00000404909 LY6DQ14210 128 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 CDK5R1Q15078 307 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 RIPPLY2Q5TAB7 128 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 DMKNQ6E0U4 476 aaPredicted RBP3.26□□□□□ -1.89
RTN4-208ENST00000404909 KLHL24Q6TFL4 600 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 GFRALQ6UXV0 394 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 SLC16A14Q7RTX9 510 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 SLC22A24Q8N4F4 322 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 RPRMLQ8N4K4 120 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 ZNF676Q8N7Q3 588 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 CPT1CQ8TCG5 803 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 NABP1Q96AH0 204 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 SMIM19Q96E16 107 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 TSC22D3Q99576 134 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 SLC25A18Q9H1K4 315 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 SIAEQ9HAT2 523 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 TMEM38BQ9NVV0 291 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 TXNL4BQ9NX01 149 aaKnown RBP3.26□□□□□ -1.89
RTN4-208ENST00000404909 PLEK2Q9NYT0 353 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 ST6GALNAC2Q9UJ37 374 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 SPTBN1Q01082 2364 aaKnown RBP3.26□□□□□ -1.89
RTN4-208ENST00000404909 TMEM269A0A1B0GVZ9 245 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 FIGNL2A6NMB9 653 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 F5H5K5 113 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 GABRPO00591 440 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 PLPP2O43688 288 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 FARS2O95363 451 aaKnown RBP3.26□□□□□ -1.89
RTN4-208ENST00000404909 SLC2A1P11166 492 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 NPR2P20594 1047 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 SLC6A9P48067 706 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 MRPS34P82930 218 aaKnown RBP3.26□□□□□ -1.89
RTN4-208ENST00000404909 MFGE8Q08431 387 aaPredicted RBP3.26□□□□□ -1.89
RTN4-208ENST00000404909 FOXF2Q12947 444 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 ALKBH1Q13686 389 aaKnown RBP3.26□□□□□ -1.89
RTN4-208ENST00000404909 ENDOGQ14249 297 aaKnown RBP3.26□□□□□ -1.89
RTN4-208ENST00000404909 PCK2Q16822 640 aa3.26□□□□□ -1.89
RTN4-208ENST00000404909 CCDC58Q4VC31 144 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms