RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 FBN2P35556 2912 aa25.49■■□□□ 1.67
USP42-202ENST00000404008 CTAG2O75638 210 aa25.48■■□□□ 1.67
USP42-202ENST00000404008 CLIC3O95833 236 aa25.48■■□□□ 1.67
USP42-202ENST00000404008 HIST1H3AP68431 136 aa25.48■■□□□ 1.67
USP42-202ENST00000404008 HIST2H3PS2Q5TEC6 136 aa25.48■■□□□ 1.67
USP42-202ENST00000404008 LCN1P1Q5VSP4 162 aa25.48■■□□□ 1.67
USP42-202ENST00000404008 CORO6Q6QEF8 472 aa25.48■■□□□ 1.67
USP42-202ENST00000404008 HIST2H3AQ71DI3 136 aa25.48■■□□□ 1.67
USP42-202ENST00000404008 ERI1Q8IV48 349 aaKnown RBP25.48■■□□□ 1.67
USP42-202ENST00000404008 LINC00346Q8IVM7 164 aa25.48■■□□□ 1.67
USP42-202ENST00000404008 AKR7LQ8NHP1 331 aa25.48■■□□□ 1.67
USP42-202ENST00000404008 HEATR1Q9H583 2144 aaKnown RBP25.48■■□□□ 1.67
USP42-202ENST00000404008 SLC22A31A6NKX4 558 aa25.47■■□□□ 1.67
USP42-202ENST00000404008 ZNF593O00488 134 aaPredicted RBP25.47■■□□□ 1.67
USP42-202ENST00000404008 ABCD4O14678 606 aa25.47■■□□□ 1.67
USP42-202ENST00000404008 MPZL2O60487 215 aa25.47■■□□□ 1.67
USP42-202ENST00000404008 RPS27P42677 84 aaKnown RBP25.47■■□□□ 1.67
USP42-202ENST00000404008 PLP2Q04941 152 aa25.47■■□□□ 1.67
USP42-202ENST00000404008 OCLNQ16625 522 aa25.47■■□□□ 1.67
USP42-202ENST00000404008 ZNF774Q6NX45 483 aa25.47■■□□□ 1.67
USP42-202ENST00000404008 CPEB3Q8NE35 698 aaKnown RBP25.47■■□□□ 1.67
USP42-202ENST00000404008 GJC3Q8NFK1 279 aa25.47■■□□□ 1.67
USP42-202ENST00000404008 RHOXF1Q8NHV9 184 aa25.47■■□□□ 1.67
USP42-202ENST00000404008 TMEM204Q9BSN7 226 aa25.47■■□□□ 1.67
USP42-202ENST00000404008 IQCMA0A1B0GVH7 501 aa25.46■■□□□ 1.67
USP42-202ENST00000404008 RER1O15258 196 aa25.46■■□□□ 1.67
USP42-202ENST00000404008 CD3EP07766 207 aa25.46■■□□□ 1.67
USP42-202ENST00000404008 SPARCP09486 303 aa25.46■■□□□ 1.67
USP42-202ENST00000404008 VHLP40337 213 aa25.46■■□□□ 1.67
USP42-202ENST00000404008 CDH11P55287 796 aa25.46■■□□□ 1.67
USP42-202ENST00000404008 NAAAQ02083 359 aa25.46■■□□□ 1.67
USP42-202ENST00000404008 SPOCK1Q08629 439 aa25.46■■□□□ 1.67
USP42-202ENST00000404008 IL18R1Q13478 541 aa25.46■■□□□ 1.67
USP42-202ENST00000404008 GGTLC2Q14390 218 aa25.46■■□□□ 1.67
USP42-202ENST00000404008 MEDAGQ5VYS4 303 aa25.46■■□□□ 1.67
USP42-202ENST00000404008 ALDH16A1Q8IZ83 802 aa25.46■■□□□ 1.67
USP42-202ENST00000404008 OR2AJ1Q8NGZ0 328 aa25.46■■□□□ 1.67
USP42-202ENST00000404008 TFAP2CQ92754 450 aa25.46■■□□□ 1.67
USP42-202ENST00000404008 RFKQ969G6 155 aa25.46■■□□□ 1.67
USP42-202ENST00000404008 C1orf198Q9H425 327 aa25.46■■□□□ 1.67
USP42-202ENST00000404008 AASSQ9UDR5 926 aa25.46■■□□□ 1.67
USP42-202ENST00000404008 GDF2Q9UK05 429 aaPredicted RBP25.46■■□□□ 1.67
USP42-202ENST00000404008 UNC79Q9P2D8 2635 aa25.46■■□□□ 1.67
USP42-202ENST00000404008 SGCEO43556 437 aa25.45■■□□□ 1.67
USP42-202ENST00000404008 SELENOFO60613 162 aa25.45■■□□□ 1.67
USP42-202ENST00000404008 ENTPD6O75354 484 aa25.45■■□□□ 1.67
USP42-202ENST00000404008 PTHP01270 115 aa25.45■■□□□ 1.67
USP42-202ENST00000404008 HTR1FP30939 366 aa25.45■■□□□ 1.67
USP42-202ENST00000404008 TLE4Q04727 773 aa25.45■■□□□ 1.67
USP42-202ENST00000404008 CCDC92Q53HC0 331 aaPredicted RBP25.45■■□□□ 1.67
USP42-202ENST00000404008 IZUMO2Q6UXV1 221 aa25.45■■□□□ 1.67
USP42-202ENST00000404008 CFAP77Q6ZQR2 320 aa25.45■■□□□ 1.67
USP42-202ENST00000404008 VASH1Q7L8A9 365 aaPredicted RBP25.45■■□□□ 1.67
USP42-202ENST00000404008 IL17RDQ8NFM7 739 aa25.45■■□□□ 1.67
USP42-202ENST00000404008 OR6N2Q8NGY6 317 aa25.45■■□□□ 1.67
USP42-202ENST00000404008 RNF115Q9Y4L5 304 aa25.45■■□□□ 1.67
USP42-202ENST00000404008 DOK2O60496 412 aa25.44■■□□□ 1.66
USP42-202ENST00000404008 TMCC2O75069 709 aa25.44■■□□□ 1.66
USP42-202ENST00000404008 GNAO1P09471 354 aa25.44■■□□□ 1.66
USP42-202ENST00000404008 APEX1P27695 318 aaKnown RBP25.44■■□□□ 1.66
USP42-202ENST00000404008 SSTR2P30874 369 aa25.44■■□□□ 1.66
USP42-202ENST00000404008 IL5RAQ01344 420 aa25.44■■□□□ 1.66
USP42-202ENST00000404008 PIAS4Q8N2W9 510 aaPredicted RBP25.44■■□□□ 1.66
USP42-202ENST00000404008 SETD9Q8NE22 299 aa25.44■■□□□ 1.66
USP42-202ENST00000404008 SLC30A7Q8NEW0 376 aa25.44■■□□□ 1.66
USP42-202ENST00000404008 MAP6Q96JE9 813 aa25.44■■□□□ 1.66
USP42-202ENST00000404008 HAO2Q9NYQ3 351 aa25.44■■□□□ 1.66
USP42-202ENST00000404008 PLEK2Q9NYT0 353 aa25.44■■□□□ 1.66
USP42-202ENST00000404008 WARS2Q9UGM6 360 aaKnown RBP25.44■■□□□ 1.66
USP42-202ENST00000404008 CADP27708 2225 aa25.44■■□□□ 1.66
USP42-202ENST00000404008 IGHV2OR16-5A0A0B4J2B6 119 aa25.44■■□□□ 1.66
USP42-202ENST00000404008 CRYAAP02489 173 aa25.44■■□□□ 1.66
USP42-202ENST00000404008 STOMP27105 288 aa25.44■■□□□ 1.66
USP42-202ENST00000404008 CALCRP30988 508 aa25.44■■□□□ 1.66
USP42-202ENST00000404008 NAA10P41227 235 aaPredicted RBP25.44■■□□□ 1.66
USP42-202ENST00000404008 MAD2L1BPQ15013 274 aaPredicted RBP25.44■■□□□ 1.66
USP42-202ENST00000404008 RAB35Q15286 201 aa25.44■■□□□ 1.66
USP42-202ENST00000404008 C6orf52Q5T4I8 152 aa25.44■■□□□ 1.66
USP42-202ENST00000404008 ADAM5Q6NVV9 412 aa25.44■■□□□ 1.66
USP42-202ENST00000404008 DPY19L4Q7Z388 723 aa25.44■■□□□ 1.66
USP42-202ENST00000404008 APH1BQ8WW43 257 aa25.44■■□□□ 1.66
USP42-202ENST00000404008 RADILQ96JH8 1075 aa25.44■■□□□ 1.66
USP42-202ENST00000404008 OR6C6A6NF89 314 aa25.43■■□□□ 1.66
USP42-202ENST00000404008 SYNGR3O43761 229 aa25.43■■□□□ 1.66
USP42-202ENST00000404008 PLAUP00749 431 aa25.43■■□□□ 1.66
USP42-202ENST00000404008 COX5BP10606 129 aa25.43■■□□□ 1.66
USP42-202ENST00000404008 APLNRP35414 380 aa25.43■■□□□ 1.66
USP42-202ENST00000404008 ISL1P61371 349 aa25.43■■□□□ 1.66
USP42-202ENST00000404008 TMED1Q13445 227 aa25.43■■□□□ 1.66
USP42-202ENST00000404008 USP51Q70EK9 711 aa25.43■■□□□ 1.66
USP42-202ENST00000404008 SLC16A9Q7RTY1 509 aa25.43■■□□□ 1.66
USP42-202ENST00000404008 DCXRQ7Z4W1 244 aa25.43■■□□□ 1.66
USP42-202ENST00000404008 CNN2Q99439 309 aaKnown RBP25.43■■□□□ 1.66
USP42-202ENST00000404008 HDHD2Q9H0R4 259 aa25.43■■□□□ 1.66
USP42-202ENST00000404008 CLEC4MQ9H2X3 399 aaPredicted RBP25.43■■□□□ 1.66
USP42-202ENST00000404008 CLN6Q9NWW5 311 aa25.43■■□□□ 1.66
USP42-202ENST00000404008 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP25.43■■□□□ 1.66
USP42-202ENST00000404008 ABCA4P78363 2273 aa25.42■■□□□ 1.66
USP42-202ENST00000404008 LOC100509620A0A075B734 347 aa25.42■■□□□ 1.66
USP42-202ENST00000404008 A0A1W2PPR1 153 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 193.6 ms