RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 OTPQ5XKR4 325 aa11.36□□□□□ -0.59
SDF4-203ENST00000403997 IL17RELQ6ZVW7 336 aa11.36□□□□□ -0.59
SDF4-203ENST00000403997 PTCHD4Q6ZW05 846 aa11.36□□□□□ -0.59
SDF4-203ENST00000403997 ZER1Q7Z7L7 766 aa11.36□□□□□ -0.59
SDF4-203ENST00000403997 ADCK1Q86TW2 530 aa11.36□□□□□ -0.59
SDF4-203ENST00000403997 ZDHHC21Q8IVQ6 265 aa11.36□□□□□ -0.59
SDF4-203ENST00000403997 GLB1L2Q8IW92 636 aa11.36□□□□□ -0.59
SDF4-203ENST00000403997 C1orf174Q8IYL3 243 aa11.36□□□□□ -0.59
SDF4-203ENST00000403997 LINC01356Q8N9X3 169 aa11.36□□□□□ -0.59
SDF4-203ENST00000403997 FANK1Q8TC84 345 aa11.36□□□□□ -0.59
SDF4-203ENST00000403997 KLF14Q8TD94 323 aaPredicted RBP11.36□□□□□ -0.59
SDF4-203ENST00000403997 ERMAPQ96PL5 475 aaPredicted RBP11.36□□□□□ -0.59
SDF4-203ENST00000403997 CCT8L2Q96SF2 557 aa11.36□□□□□ -0.59
SDF4-203ENST00000403997 NUAK2Q9H093 628 aa11.36□□□□□ -0.59
SDF4-203ENST00000403997 NARFLQ9H6Q4 476 aa11.36□□□□□ -0.59
SDF4-203ENST00000403997 IL1RAPQ9NPH3 570 aa11.36□□□□□ -0.59
SDF4-203ENST00000403997 NKIRAS2Q9NYR9 191 aa11.36□□□□□ -0.59
SDF4-203ENST00000403997 VSX1Q9NZR4 365 aaPredicted RBP11.36□□□□□ -0.59
SDF4-203ENST00000403997 NDRG4Q9ULP0 352 aaKnown RBP11.36□□□□□ -0.59
SDF4-203ENST00000403997 TMCC3Q9ULS5 477 aa11.36□□□□□ -0.59
SDF4-203ENST00000403997 COA3Q9Y2R0 106 aaPredicted RBP11.36□□□□□ -0.59
SDF4-203ENST00000403997 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.36□□□□□ -0.593e-7■■■□□ 15.2
SDF4-203ENST00000403997 IGHV1-69-2A0A0G2JMI3 117 aa11.35□□□□□ -0.59
SDF4-203ENST00000403997 PLSCR5A0PG75 271 aa11.35□□□□□ -0.59
SDF4-203ENST00000403997 B2RBV5 119 aa11.35□□□□□ -0.59
SDF4-203ENST00000403997 SPRY3O43610 288 aa11.35□□□□□ -0.59
SDF4-203ENST00000403997 DOK2O60496 412 aa11.35□□□□□ -0.59
SDF4-203ENST00000403997 RP2O75695 350 aa11.35□□□□□ -0.59
SDF4-203ENST00000403997 PPP1R3DO95685 299 aa11.35□□□□□ -0.59
SDF4-203ENST00000403997 ABHD16AO95870 558 aa11.35□□□□□ -0.59
SDF4-203ENST00000403997 TXNDC12O95881 172 aa11.35□□□□□ -0.59
SDF4-203ENST00000403997 COX5BP10606 129 aa11.35□□□□□ -0.59
SDF4-203ENST00000403997 SRD5A1P18405 259 aa11.35□□□□□ -0.59
SDF4-203ENST00000403997 HNF1AP20823 631 aa11.35□□□□□ -0.59
SDF4-203ENST00000403997 IFNGR2P38484 337 aa11.35□□□□□ -0.59
SDF4-203ENST00000403997 HTR5AP47898 357 aa11.35□□□□□ -0.59
SDF4-203ENST00000403997 CDH15P55291 814 aa11.35□□□□□ -0.59
SDF4-203ENST00000403997 TEKQ02763 1124 aa11.35□□□□□ -0.59
SDF4-203ENST00000403997 CR1LQ2VPA4 569 aa11.35□□□□□ -0.59
SDF4-203ENST00000403997 RFX4Q33E94 735 aa11.35□□□□□ -0.59
SDF4-203ENST00000403997 MBNL2Q5VZF2 373 aaKnown RBP11.35□□□□□ -0.59
SDF4-203ENST00000403997 CYP2R1Q6VVX0 501 aa11.35□□□□□ -0.59
SDF4-203ENST00000403997 RFPL4BQ6ZWI9 263 aa11.35□□□□□ -0.59
SDF4-203ENST00000403997 CLDND2Q8NHS1 167 aa11.35□□□□□ -0.59
SDF4-203ENST00000403997 IPCEF1Q8WWN9 437 aaPredicted RBP11.35□□□□□ -0.59
SDF4-203ENST00000403997 NSL1Q96IY1 281 aa11.35□□□□□ -0.59
SDF4-203ENST00000403997 PLEK2Q9NYT0 353 aa11.35□□□□□ -0.59
SDF4-203ENST00000403997 GRIP1Q9Y3R0 1128 aa11.35□□□□□ -0.59
SDF4-203ENST00000403997 ATRQ13535 2644 aa11.34□□□□□ -0.59
SDF4-203ENST00000403997 WNT9BO14905 357 aa11.34□□□□□ -0.59
SDF4-203ENST00000403997 CRABP1P29762 137 aa11.34□□□□□ -0.59
SDF4-203ENST00000403997 SLC6A6P31641 620 aa11.34□□□□□ -0.59
SDF4-203ENST00000403997 CRYBB2P43320 205 aa11.34□□□□□ -0.59
SDF4-203ENST00000403997 MMP15P51511 669 aa11.34□□□□□ -0.59
SDF4-203ENST00000403997 LSM6P62312 80 aaKnown RBP11.34□□□□□ -0.59
SDF4-203ENST00000403997 AQP6Q13520 282 aa11.34□□□□□ -0.59
SDF4-203ENST00000403997 DNM1P34Q6PK57 102 aa11.34□□□□□ -0.59
SDF4-203ENST00000403997 USP51Q70EK9 711 aa11.34□□□□□ -0.59
SDF4-203ENST00000403997 VASH1Q7L8A9 365 aaPredicted RBP11.34□□□□□ -0.59
SDF4-203ENST00000403997 CXXC5Q7LFL8 322 aaKnown RBP11.34□□□□□ -0.59
SDF4-203ENST00000403997 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.34□□□□□ -0.59
SDF4-203ENST00000403997 JAZF1Q86VZ6 243 aa11.34□□□□□ -0.59
SDF4-203ENST00000403997 FITM2Q8N6M3 262 aa11.34□□□□□ -0.59
SDF4-203ENST00000403997 GNPDA2Q8TDQ7 276 aa11.34□□□□□ -0.59
SDF4-203ENST00000403997 SAMD8Q96LT4 415 aa11.34□□□□□ -0.59
SDF4-203ENST00000403997 TSSK2Q96PF2 358 aa11.34□□□□□ -0.59
SDF4-203ENST00000403997 IFT27Q9BW83 186 aa11.34□□□□□ -0.59
SDF4-203ENST00000403997 OR52D1Q9H346 318 aa11.34□□□□□ -0.59
SDF4-203ENST00000403997 SAP30LQ9HAJ7 183 aa11.34□□□□□ -0.59
SDF4-203ENST00000403997 SRA1Q9HD15 236 aaKnown RBP11.34□□□□□ -0.59
SDF4-203ENST00000403997 TBCCD1Q9NVR7 557 aa11.34□□□□□ -0.59
SDF4-203ENST00000403997 TREM2Q9NZC2 230 aa11.34□□□□□ -0.59
SDF4-203ENST00000403997 ASH2LQ9UBL3 628 aa11.34□□□□□ -0.59
SDF4-203ENST00000403997 POLR1DQ9Y2S0 133 aa11.34□□□□□ -0.59
SDF4-203ENST00000403997 RNF212BA8MTL3 300 aa11.33□□□□□ -0.6
SDF4-203ENST00000403997 B4DSR2 109 aa11.33□□□□□ -0.6
SDF4-203ENST00000403997 H3BSA7 217 aa11.33□□□□□ -0.6
SDF4-203ENST00000403997 TIMM8AO60220 97 aaPredicted RBP11.33□□□□□ -0.6
SDF4-203ENST00000403997 ICMTO60725 284 aa11.33□□□□□ -0.6
SDF4-203ENST00000403997 KRT36O76013 467 aa11.33□□□□□ -0.6
SDF4-203ENST00000403997 GPANK1O95872 356 aa11.33□□□□□ -0.6
SDF4-203ENST00000403997 RENP00797 406 aa11.33□□□□□ -0.6
SDF4-203ENST00000403997 IGHV1-46P01743 117 aa11.33□□□□□ -0.6
SDF4-203ENST00000403997 GSTM3P21266 225 aa11.33□□□□□ -0.6
SDF4-203ENST00000403997 FPR3P25089 353 aa11.33□□□□□ -0.6
SDF4-203ENST00000403997 NOS3P29474 1203 aa11.33□□□□□ -0.6
SDF4-203ENST00000403997 LIPAP38571 399 aa11.33□□□□□ -0.6
SDF4-203ENST00000403997 MVKQ03426 396 aa11.33□□□□□ -0.6
SDF4-203ENST00000403997 TMEM255AQ5JRV8 349 aa11.33□□□□□ -0.6
SDF4-203ENST00000403997 FAM209AQ5JX71 171 aa11.33□□□□□ -0.6
SDF4-203ENST00000403997 C1orf94Q6P1W5 598 aa11.33□□□□□ -0.6
SDF4-203ENST00000403997 LEG1Q6P5S2 330 aa11.33□□□□□ -0.6
SDF4-203ENST00000403997 OR4K13Q8NH42 304 aa11.33□□□□□ -0.6
SDF4-203ENST00000403997 SLC7A6Q92536 515 aa11.33□□□□□ -0.6
SDF4-203ENST00000403997 C1orf159Q96HA4 380 aa11.33□□□□□ -0.6
SDF4-203ENST00000403997 NMNAT3Q96T66 252 aa11.33□□□□□ -0.6
SDF4-203ENST00000403997 RACGAP1Q9H0H5 632 aa11.33□□□□□ -0.6
SDF4-203ENST00000403997 CYSLTR2Q9NS75 346 aa11.33□□□□□ -0.6
SDF4-203ENST00000403997 ACTR3BQ9P1U1 418 aa11.33□□□□□ -0.6
SDF4-203ENST00000403997 TMEFF2Q9UIK5 374 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms