RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 AHSPQ9NZD4 102 aa3.85□□□□□ -1.79
HMGB3P19-201ENST00000403971 DHRS4-AS1Q9P1J3 65 aa3.85□□□□□ -1.79
HMGB3P19-201ENST00000403971 VPS29Q9UBQ0 182 aa3.85□□□□□ -1.79
HMGB3P19-201ENST00000403971 FIS1Q9Y3D6 152 aa3.85□□□□□ -1.79
HMGB3P19-201ENST00000403971 AP1M2Q9Y6Q5 423 aa3.85□□□□□ -1.79
HMGB3P19-201ENST00000403971 WDR87Q6ZQQ6 2873 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 IGHV5-51A0A0C4DH38 117 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 LRIT2A6NDA9 550 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 D6RAR5 112 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 HAT1O14929 419 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 UBDO15205 165 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 SH3BGRLO75368 114 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 MYO1DO94832 1006 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 SCELO95171 688 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 LDOC1O95751 146 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 SLC35G6P0C7Q6 338 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 LINC00032P0C843 101 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 THRAP10827 490 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 PRPS2P11908 318 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 HSD17B1P14061 328 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 IDO1P14902 403 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 NELFEP18615 380 aaKnown RBP3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 PPP2R1BP30154 601 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 ASMTP46597 345 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 GABRA4P48169 554 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 ACADVLP49748 655 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 GFERP55789 205 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 STXBP1P61764 594 aaKnown RBP3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 TRA2BP62995 288 aaKnown RBP3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 SKP1P63208 163 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 RGS1Q08116 209 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 TGM3Q08188 693 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 KIAA0040Q15053 153 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 SF3A2Q15428 464 aaKnown RBP3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 VWA2Q5GFL6 755 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 KHDRBS2Q5VWX1 349 aaKnown RBP3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 IRGCQ6NXR0 463 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 GUSBP11Q6P575 273 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 C6orf89Q6UWU4 347 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 APOOLQ6UXV4 268 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 TRPM8Q7Z2W7 1104 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 PAGE2Q7Z2X7 111 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 VN1R4Q7Z5H5 301 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 HIPK1Q86Z02 1210 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 NAXDQ8IW45 347 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 ELMOD2Q8IZ81 293 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 FNDC5Q8NAU1 212 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 OR2L5Q8NG80 312 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 OR4F17Q8NGA8 305 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 ZNF671Q8TAW3 534 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 NT5CQ8TCD5 201 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 STARD8Q92502 1023 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 OR4F4Q96R69 305 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 TTYH2Q9BSA4 534 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 TBCDQ9BTW9 1192 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 ROGDIQ9GZN7 287 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 SPNS1Q9H2V7 528 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 ZNF385DQ9H6B1 395 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 LRTM1Q9HBL6 345 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 FAM60AQ9NP50 221 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 SAR1AQ9NR31 198 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 FARSBQ9NSD9 589 aaKnown RBP3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 AIG1Q9NVV5 245 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 MLXQ9UH92 298 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 EIF3LQ9Y262 564 aaKnown RBP3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 SLC9A8Q9Y2E8 581 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 SLC22A7Q9Y694 548 aa3.84□□□□□ -1.79
HMGB3P19-201ENST00000403971 SDK2Q58EX2 2172 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 DOCK10Q96BY6 2186 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 ZFHX2Q9C0A1 2572 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 A0A0J9YVX5 310 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 IGHV5-10-1A0A0J9YXX1 117 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 CCT8L1PA6NM43 557 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 E9PBE3 544 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 H0YGG7 62 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 H3BMH7 237 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 TMX2-CTNND1H3BSU7 103 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 PSMD12O00232 456 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 PLPP1O14494 284 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 ARPC1BO15143 372 aaKnown RBP3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 KLHL41O60662 606 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 ZNF354AO60765 605 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 TBX19O60806 448 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 PEX11AO75192 247 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 ZNF253O75346 499 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 SEC22BO75396 215 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 ATP5HO75947 161 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 ETHE1O95571 254 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 MT-ATP6P00846 226 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 SMIM10L1P0DMW3 83 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 BCKDHAP12694 445 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 PVRP15151 417 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 NCF2P19878 526 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 PRPS1L1P21108 318 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 CSRP1P21291 193 aaKnown RBP3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 SAA4P35542 130 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 MNAT1P51948 309 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 SLC7A2P52569 658 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 DIO3P55073 304 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 CLDN8P56748 225 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms