RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 RAB38P57729 211 aa12.67□□□□□ -0.38
HMGA2-204ENST00000403681 TMEM255AQ5JRV8 349 aa12.67□□□□□ -0.38
HMGA2-204ENST00000403681 ABHD12BQ7Z5M8 362 aaPredicted RBP12.67□□□□□ -0.38
HMGA2-204ENST00000403681 MARCH3Q86UD3 253 aa12.67□□□□□ -0.38
HMGA2-204ENST00000403681 LINC00346Q8IVM7 164 aa12.67□□□□□ -0.38
HMGA2-204ENST00000403681 ZNF251Q9BRH9 671 aa12.67□□□□□ -0.38
HMGA2-204ENST00000403681 LYRM4Q9HD34 91 aa12.67□□□□□ -0.38
HMGA2-204ENST00000403681 CLRN1P58418 232 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 FXYD4P59646 89 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 C1orf61Q13536 156 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 VWA2Q5GFL6 755 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 FAM213BQ8TBF2 198 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 PRSS27Q9BQR3 290 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 HDAC8Q9BY41 377 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 OR52A1Q9UKL2 312 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 B3GALT1Q9Y5Z6 326 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 RLFQ13129 1914 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 URB1O60287 2271 aaKnown RBP12.66□□□□□ -0.38
HMGA2-204ENST00000403681 E9PQ18 207 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 OR13C7P0DN81 318 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 SCAND1P57086 179 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 UBE2KP61086 200 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 RPL18Q07020 188 aaKnown RBP12.66□□□□□ -0.38
HMGA2-204ENST00000403681 TDGQ13569 410 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 SLC17A1Q14916 467 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 OR52W1Q6IF63 320 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 WDR88Q6ZMY6 472 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 C12orf40Q86WS4 652 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 RCBTB1Q8NDN9 531 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 PGAM5Q96HS1 289 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 MRGPRX3Q96LB0 322 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 VN1R3Q9BXE9 311 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 TMEM59Q9BXS4 323 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 LHX9Q9NQ69 397 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 SERINC1Q9NRX5 453 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 ZNF346Q9UL40 294 aaKnown RBP12.66□□□□□ -0.38
HMGA2-204ENST00000403681 NME2P1O60361 137 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 PPP2CBP62714 309 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 PPP2CAP67775 309 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 ATPAF1Q5TC12 328 aaPredicted RBP12.66□□□□□ -0.38
HMGA2-204ENST00000403681 ANGPTL5Q86XS5 388 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 HSD17B11Q8NBQ5 300 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 CTSFQ9UBX1 484 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 ZNF223Q9UK11 482 aaPredicted RBP12.66□□□□□ -0.38
HMGA2-204ENST00000403681 TRAV8-7A0A075B6U6 113 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 A0A0J9YY10 115 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 LOC107986453A0A1B0GWG9 222 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 OR2M5A3KFT3 312 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 EPPINO95925 133 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 NME1P15531 152 aaKnown RBP12.66□□□□□ -0.38
HMGA2-204ENST00000403681 F2RL1P55085 397 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 SSX2Q16385 188 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 MED25Q71SY5 747 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 KDM8Q8N371 416 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 OR9K2Q8NGE7 335 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 WNT2BQ93097 391 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 FKRPQ9H9S5 495 aa12.66□□□□□ -0.38
HMGA2-204ENST00000403681 NUDT21O43809 227 aaKnown RBP12.65□□□□□ -0.38
HMGA2-204ENST00000403681 ZNF354AO60765 605 aaPredicted RBP12.65□□□□□ -0.38
HMGA2-204ENST00000403681 CDKN2AP42771 156 aaKnown RBP12.65□□□□□ -0.38
HMGA2-204ENST00000403681 ARL6IP1Q15041 203 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 ZNF77Q15935 545 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 CARD17Q5XLA6 110 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 OR4N2Q8NGD1 307 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 HOXB13Q92826 284 aaPredicted RBP12.65□□□□□ -0.38
HMGA2-204ENST00000403681 C1orf123Q9NWV4 160 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 MRM2Q9UI43 246 aaKnown RBP12.65□□□□□ -0.38
HMGA2-204ENST00000403681 MYLKQ15746 1914 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 TMEM272A0A1B0GTI8 110 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 MPTX1A8MV57 137 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 H7C1Q1 480 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 TAAR5O14804 337 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 SMIM6P0DI80 62 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 RUNX3Q13761 415 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 WDR38Q5JTN6 314 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 TMEM225Q6GV28 225 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 TMEM151BQ8IW70 566 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 C7orf61Q8IZ16 206 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 TGIF2Q9GZN2 237 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 MIOXQ9UGB7 285 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 FBXO7Q9Y3I1 522 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 A0A087WUJ7 227 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 UMAD1C9J7I0 102 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 ZNF93P35789 620 aaPredicted RBP12.65□□□□□ -0.38
HMGA2-204ENST00000403681 NANOS3P60323 173 aaKnown RBP12.65□□□□□ -0.38
HMGA2-204ENST00000403681 B2MP61769 119 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 ZIC1Q15915 447 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 SLC30A7Q8NEW0 376 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 RXFP4Q8TDU9 374 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 C4orf45Q96LM5 186 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 OR10A5Q9H207 317 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 SLC17A5Q9NRA2 495 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 FRRS1LQ9P0K9 344 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 TNFSF18Q9UNG2 199 aa12.65□□□□□ -0.38
HMGA2-204ENST00000403681 C9orf170A2RU37 121 aa12.64□□□□□ -0.39
HMGA2-204ENST00000403681 A6NIZ1 184 aa12.64□□□□□ -0.39
HMGA2-204ENST00000403681 HIDE1A8MVS5 230 aa12.64□□□□□ -0.39
HMGA2-204ENST00000403681 DNASE2O00115 360 aaPredicted RBP12.64□□□□□ -0.39
HMGA2-204ENST00000403681 ABCD4O14678 606 aa12.64□□□□□ -0.39
HMGA2-204ENST00000403681 JTBO76095 146 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms