RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 CAMK2AQ9UQM7 478 aa10.89□□□□□ -0.67
CLIP4-203ENST00000401617 TNFSF11O14788 317 aa10.88□□□□□ -0.67
CLIP4-203ENST00000401617 CTDSPLO15194 276 aa10.88□□□□□ -0.67
CLIP4-203ENST00000401617 KIR2DL3P43628 341 aa10.88□□□□□ -0.67
CLIP4-203ENST00000401617 MMP15P51511 669 aa10.88□□□□□ -0.67
CLIP4-203ENST00000401617 CLDN20P56880 219 aa10.88□□□□□ -0.67
CLIP4-203ENST00000401617 SCAND1P57086 179 aa10.88□□□□□ -0.67
CLIP4-203ENST00000401617 AIMP2Q13155 320 aaKnown RBP10.88□□□□□ -0.67
CLIP4-203ENST00000401617 ODF4Q2M2E3 257 aa10.88□□□□□ -0.67
CLIP4-203ENST00000401617 HACD4Q5VWC8 232 aa10.88□□□□□ -0.67
CLIP4-203ENST00000401617 CMTM4Q8IZR5 234 aa10.88□□□□□ -0.67
CLIP4-203ENST00000401617 ZIC4Q8N9L1 334 aa10.88□□□□□ -0.67
CLIP4-203ENST00000401617 ZNF671Q8TAW3 534 aa10.88□□□□□ -0.67
CLIP4-203ENST00000401617 SLAMF6Q96DU3 332 aa10.88□□□□□ -0.67
CLIP4-203ENST00000401617 ITPKCQ96DU7 683 aa10.88□□□□□ -0.67
CLIP4-203ENST00000401617 SLC25A38Q96DW6 304 aa10.88□□□□□ -0.67
CLIP4-203ENST00000401617 ABCG5Q9H222 651 aa10.88□□□□□ -0.67
CLIP4-203ENST00000401617 RBFOX1Q9NWB1 397 aaKnown RBP10.88□□□□□ -0.67
CLIP4-203ENST00000401617 OR5V1Q9UGF6 321 aa10.88□□□□□ -0.67
CLIP4-203ENST00000401617 FOXJ3Q9UPW0 622 aa10.88□□□□□ -0.67
CLIP4-203ENST00000401617 EMC9Q9Y3B6 208 aa10.88□□□□□ -0.67
CLIP4-203ENST00000401617 A0A1B0GVC2 190 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 LINC00854A0A1B0GVQ3 168 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 A0A1W2PPL8 197 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 A6NIN4 97 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 LANCL1O43813 399 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 H2BFMP0C1H6 154 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 IGFBP3P17936 291 aaPredicted RBP10.87□□□□□ -0.67
CLIP4-203ENST00000401617 FSTP19883 344 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 ACHEP22303 614 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 CD82P27701 267 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 GFRA1P56159 465 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 OC90Q02509 493 aaPredicted RBP10.87□□□□□ -0.67
CLIP4-203ENST00000401617 STPG1Q5TH74 334 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 ABHD17BQ5VST6 288 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 CARD17Q5XLA6 110 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 SPINK14Q6IE38 97 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 ZNF704Q6ZNC4 412 aaPredicted RBP10.87□□□□□ -0.67
CLIP4-203ENST00000401617 DTX1Q86Y01 620 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 UBQLNLQ8IYU4 475 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 DUSP18Q8NEJ0 188 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 OR14L1PQ8NHC6 308 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 TSEN15Q8WW01 171 aaKnown RBP10.87□□□□□ -0.67
CLIP4-203ENST00000401617 THAP7Q9BT49 309 aaPredicted RBP10.87□□□□□ -0.67
CLIP4-203ENST00000401617 LIN7BQ9HAP6 207 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 FAM206AQ9NX38 181 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 FOXD3Q9UJU5 478 aaPredicted RBP10.87□□□□□ -0.67
CLIP4-203ENST00000401617 GDF2Q9UK05 429 aaPredicted RBP10.87□□□□□ -0.67
CLIP4-203ENST00000401617 ETV7Q9Y603 341 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 IGHV3-15A0A0B4J1V0 119 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 TMEM269A0A1B0GVZ9 245 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 PRR33A8MZF0 331 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 CDK2AP1O14519 115 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 SMAD9O15198 467 aaKnown RBP10.87□□□□□ -0.67
CLIP4-203ENST00000401617 LYRM1O43325 122 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 GSTZ1O43708 216 aaPredicted RBP10.87□□□□□ -0.67
CLIP4-203ENST00000401617 ENPP1P22413 925 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 CDAP32320 146 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 RANBP1P43487 201 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 MAP2K3P46734 347 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 LSM6P62312 80 aaKnown RBP10.87□□□□□ -0.67
CLIP4-203ENST00000401617 PITPNAQ00169 270 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 TOMM20Q15388 145 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 TMEM244Q5VVB8 128 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 CFAP77Q6ZQR2 320 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 ESPNLQ6ZVH7 1005 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 FCRLAQ7L513 359 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.87□□□□□ -0.67
CLIP4-203ENST00000401617 RFT1Q96AA3 541 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 INTS12Q96CB8 462 aaKnown RBP10.87□□□□□ -0.67
CLIP4-203ENST00000401617 ZNF385AQ96PM9 386 aaKnown RBP10.87□□□□□ -0.67
CLIP4-203ENST00000401617 SIGLEC12Q96PQ1 595 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 FAM173AQ9BQD7 235 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 EMC7Q9NPA0 242 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 PNRC2Q9NPJ4 139 aaKnown RBP10.87□□□□□ -0.67
CLIP4-203ENST00000401617 CENPMQ9NSP4 180 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 HHLA2Q9UM44 414 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 BOKQ9UMX3 212 aaPredicted RBP10.87□□□□□ -0.67
CLIP4-203ENST00000401617 DHDHQ9UQ10 334 aa10.87□□□□□ -0.67
CLIP4-203ENST00000401617 CDRT15L2A8MXV6 281 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 NPIPA2E9PIF3 369 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 NPIPA3F8WFD2 350 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 H0YC42 278 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 LINC01387J3KSC0 135 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 ADRB1P08588 477 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 FTH1P19P0C7X4 201 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 PRKAR1AP10644 381 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 CASRP41180 1078 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 CSNK1A1P48729 337 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 CLDN15P56746 228 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 CARD18P57730 90 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 CD300CQ08708 224 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 PHYHD1Q5SRE7 291 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 AGAP6Q5VW22 663 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 FAM166AQ6J272 317 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 MZT2BQ6NZ67 158 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 DTX3Q8N9I9 347 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 DEFB124Q8NES8 71 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 OR2M7Q8NG81 312 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 RAB40AQ8WXH6 277 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms