RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 TXNIPQ9H3M7 391 aa16.54■□□□□ 0.24
COL18A1-204ENST00000400337 BCO1Q9HAY6 547 aa16.54■□□□□ 0.24
COL18A1-204ENST00000400337 TIMM10BQ9Y5J6 103 aa16.54■□□□□ 0.24
COL18A1-204ENST00000400337 TOR1AO14656 332 aa16.54■□□□□ 0.24
COL18A1-204ENST00000400337 RBP2P50120 134 aa16.54■□□□□ 0.24
COL18A1-204ENST00000400337 OR10A3P58181 314 aa16.54■□□□□ 0.24
COL18A1-204ENST00000400337 ZNF793Q6ZN11 406 aa16.54■□□□□ 0.24
COL18A1-204ENST00000400337 PRSS35Q8N3Z0 413 aa16.54■□□□□ 0.24
COL18A1-204ENST00000400337 FAM212BQ9NTI7 297 aaPredicted RBP16.54■□□□□ 0.24
COL18A1-204ENST00000400337 DOCK1Q14185 1865 aa16.54■□□□□ 0.24
COL18A1-204ENST00000400337 CXCL13O43927 109 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 CLDN1O95832 211 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 PTAFRP25105 342 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 HTRA4P83105 476 aaPredicted RBP16.53■□□□□ 0.24
COL18A1-204ENST00000400337 SMIM19Q96E16 107 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 SPACA5Q96QH8 159 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 KCNG2Q9UJ96 466 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 PAPPAQ13219 1627 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 ENSAO43768 121 aaKnown RBP16.53■□□□□ 0.24
COL18A1-204ENST00000400337 TAS2R30P59541 319 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 DOC2BQ14184 412 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 CLINT1Q14677 625 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 ADGRF3Q8IZF5 1079 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 ZC3HAV1LQ96H79 300 aaKnown RBP16.53■□□□□ 0.24
COL18A1-204ENST00000400337 OR2A14Q96R47 310 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 USB1Q9BQ65 265 aaKnown RBP16.53■□□□□ 0.24
COL18A1-204ENST00000400337 S1PR5Q9H228 398 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 ISG20L2Q9H9L3 353 aaKnown RBP16.53■□□□□ 0.24
COL18A1-204ENST00000400337 IGHV3-15A0A0B4J1V0 119 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 SHISA7A6NL88 538 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 M0R135 149 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 NME2P22392 152 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 FOXB2Q5VYV0 432 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 ZNF799Q96GE5 643 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 BARHL1Q9BZE3 327 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 DECR2Q9NUI1 292 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 GFOD1Q9NXC2 390 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 SLC22A13Q9Y226 551 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 CDK5R1Q15078 307 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 FJX1Q86VR8 437 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 SUMF1Q8NBK3 374 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 KIRREL1Q96J84 757 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 ARRDC1-AS1Q9H2J1 176 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 ISYNA1Q9NPH2 558 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 GPR84Q9NQS5 396 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 B3GALT5Q9Y2C3 310 aa16.53■□□□□ 0.24
COL18A1-204ENST00000400337 HS3ST1O14792 307 aa16.52■□□□□ 0.24
COL18A1-204ENST00000400337 DEGS1O15121 323 aa16.52■□□□□ 0.24
COL18A1-204ENST00000400337 RRP8O43159 456 aaKnown RBP16.52■□□□□ 0.24
COL18A1-204ENST00000400337 GMDSO60547 372 aa16.52■□□□□ 0.24
COL18A1-204ENST00000400337 CCL7P80098 99 aa16.52■□□□□ 0.24
COL18A1-204ENST00000400337 MRPS34P82930 218 aaKnown RBP16.52■□□□□ 0.24
COL18A1-204ENST00000400337 HTD2P86397 168 aa16.52■□□□□ 0.24
COL18A1-204ENST00000400337 KIAA0040Q15053 153 aa16.52■□□□□ 0.24
COL18A1-204ENST00000400337 FAM213BQ8TBF2 198 aa16.52■□□□□ 0.24
COL18A1-204ENST00000400337 BORCS7Q96B45 105 aa16.52■□□□□ 0.24
COL18A1-204ENST00000400337 MRGPRX4Q96LA9 322 aa16.52■□□□□ 0.24
COL18A1-204ENST00000400337 TGM4P49221 684 aa16.52■□□□□ 0.24
COL18A1-204ENST00000400337 HOXA1P49639 335 aaPredicted RBP16.52■□□□□ 0.24
COL18A1-204ENST00000400337 EGR3Q06889 387 aa16.52■□□□□ 0.24
COL18A1-204ENST00000400337 BTN1A1Q13410 526 aa16.52■□□□□ 0.24
COL18A1-204ENST00000400337 ATPAF1Q5TC12 328 aaPredicted RBP16.52■□□□□ 0.24
COL18A1-204ENST00000400337 CADM3Q8N126 398 aa16.52■□□□□ 0.24
COL18A1-204ENST00000400337 SVBPQ8N300 66 aa16.52■□□□□ 0.24
COL18A1-204ENST00000400337 ZNF707Q96C28 371 aaPredicted RBP16.52■□□□□ 0.24
COL18A1-204ENST00000400337 OXGR1Q96P68 337 aa16.52■□□□□ 0.24
COL18A1-204ENST00000400337 HSD17B6O14756 317 aa16.52■□□□□ 0.24
COL18A1-204ENST00000400337 NXPH3O95157 252 aa16.52■□□□□ 0.24
COL18A1-204ENST00000400337 PPT1P50897 306 aa16.52■□□□□ 0.24
COL18A1-204ENST00000400337 TMEM217Q8N7C4 229 aa16.52■□□□□ 0.24
COL18A1-204ENST00000400337 OR4A16Q8NH70 328 aa16.52■□□□□ 0.24
COL18A1-204ENST00000400337 PLA2G12AQ9BZM1 189 aa16.52■□□□□ 0.24
COL18A1-204ENST00000400337 MOB1AQ9H8S9 216 aa16.52■□□□□ 0.24
COL18A1-204ENST00000400337 CTSFQ9UBX1 484 aa16.52■□□□□ 0.24
COL18A1-204ENST00000400337 KLF13Q9Y2Y9 288 aaPredicted RBP16.52■□□□□ 0.24
COL18A1-204ENST00000400337 A0A0B4J203 849 aa16.52■□□□□ 0.23
COL18A1-204ENST00000400337 AIPO00170 330 aa16.52■□□□□ 0.23
COL18A1-204ENST00000400337 SSX4O60224 188 aa16.52■□□□□ 0.23
COL18A1-204ENST00000400337 RFC3P40938 356 aa16.52■□□□□ 0.23
COL18A1-204ENST00000400337 GPR3P46089 330 aa16.52■□□□□ 0.23
COL18A1-204ENST00000400337 BDH1Q02338 343 aa16.52■□□□□ 0.23
COL18A1-204ENST00000400337 CST9LP1Q5W188 147 aa16.52■□□□□ 0.23
COL18A1-204ENST00000400337 H1FXQ92522 213 aaKnown RBP16.52■□□□□ 0.23
COL18A1-204ENST00000400337 SLC7A6Q92536 515 aa16.52■□□□□ 0.23
COL18A1-204ENST00000400337 SLC10A1Q14973 349 aa16.52■□□□□ 0.23
COL18A1-204ENST00000400337 CD276Q5ZPR3 534 aa16.52■□□□□ 0.23
COL18A1-204ENST00000400337 ZNF687Q8N1G0 1237 aa16.52■□□□□ 0.23
COL18A1-204ENST00000400337 AMER3Q8N944 861 aa16.52■□□□□ 0.23
COL18A1-204ENST00000400337 LINC01555Q8NAE3 123 aa16.52■□□□□ 0.23
COL18A1-204ENST00000400337 GPR119Q8TDV5 335 aa16.52■□□□□ 0.23
COL18A1-204ENST00000400337 SIGLEC11Q96RL6 698 aa16.52■□□□□ 0.23
COL18A1-204ENST00000400337 A4GNTQ9UNA3 340 aa16.52■□□□□ 0.23
COL18A1-204ENST00000400337 YBX2Q9Y2T7 364 aaKnown RBP16.52■□□□□ 0.23
COL18A1-204ENST00000400337 A0A096LPE4 126 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 A0A1W2PPZ6 126 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 TMEM235A6NFC5 223 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 CCSO14618 274 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 S100A11P31949 105 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 HLA-BQ31612 363 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 USP51Q70EK9 711 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms