RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 PRR7Q8TB68 274 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 MRGPRX1Q96LB2 322 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 GSCP56915 257 aaPredicted RBP12.57□□□□□ -0.4
VAPA-202ENST00000400000 DUSP6Q16828 381 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 RTL6Q6ICC9 239 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 MOB3BQ86TA1 216 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 TMEM200AQ86VY9 491 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 MAML2Q8IZL2 1156 aaPredicted RBP12.57□□□□□ -0.4
VAPA-202ENST00000400000 RTL8AQ9BWD3 113 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 ZCCHC4Q9H5U6 513 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 CHEK1O14757 476 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 EIF1BO60739 113 aaKnown RBP12.57□□□□□ -0.4
VAPA-202ENST00000400000 HTR4Q13639 388 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.57□□□□□ -0.4
VAPA-202ENST00000400000 EXO1Q9UQ84 846 aaKnown RBP12.57□□□□□ -0.4
VAPA-202ENST00000400000 TCRBV3S1A0A5B6 114 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 FABP7O15540 132 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 OR2F2O95006 317 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 RAB40ALP0C0E4 278 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 B4GALT1P15291 398 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 HIST1H1CP16403 213 aaKnown RBP12.57□□□□□ -0.4
VAPA-202ENST00000400000 S100A7AQ86SG5 101 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 RETREG3Q86VR2 466 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 KCNG3Q8TAE7 436 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 RAB40AQ8WXH6 277 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 SLC22A11Q9NSA0 550 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 NDRG3Q9UGV2 375 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 CRYBG1Q9Y4K1 1723 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 C5P01031 1676 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 ALOX5APP20292 161 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 NTF3P20783 257 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 DLX5P56178 289 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 C11orf42Q8N5U0 333 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 CMBLQ96DG6 245 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 ASCL1P50553 236 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 Q499Y3 187 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 WDR5BQ86VZ2 330 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 TMEM123Q8N131 208 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 ZNF454Q8N9F8 522 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 BCL7CQ8WUZ0 217 aaPredicted RBP12.56□□□□□ -0.4
VAPA-202ENST00000400000 FAM122AQ96E09 287 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 LOC100289279A0A1B0GTE1 492 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 TERTO14746 1132 aaKnown RBP12.56□□□□□ -0.4
VAPA-202ENST00000400000 ARPC3O15145 178 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 FGF17O60258 216 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 PRAF2O60831 178 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 ALPLP05186 524 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 SLC19A1P41440 591 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 ZNF77Q15935 545 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 PAQR6Q6TCH4 344 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 TXLNGYQ9BZA5 131 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 SH2D7A6NKC9 451 aaPredicted RBP12.56□□□□□ -0.4
VAPA-202ENST00000400000 SNAPINO95295 136 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 FAM122CQ6P4D5 195 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 TMEM99Q8N816 258 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 OR2G3Q8NGZ4 309 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 AKR7LQ8NHP1 331 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 MRPS24Q96EL2 167 aaKnown RBP12.56□□□□□ -0.4
VAPA-202ENST00000400000 TGIF2Q9GZN2 237 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 HINT3Q9NQE9 182 aaKnown RBP12.56□□□□□ -0.4
VAPA-202ENST00000400000 A0A1W2PR48 441 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 PENKP01210 267 aaPredicted RBP12.56□□□□□ -0.4
VAPA-202ENST00000400000 OR5I1Q13606 314 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 PYCR3Q53H96 274 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 EXD3Q8N9H8 876 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 OR4Q3Q8NH05 313 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 DHRS9Q9BPW9 319 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 ZNF2Q9BSG1 426 aaPredicted RBP12.56□□□□□ -0.4
VAPA-202ENST00000400000 TMEM43Q9BTV4 400 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 INPP5EQ9NRR6 644 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 NPTNQ9Y639 398 aa12.56□□□□□ -0.4
VAPA-202ENST00000400000 DEFB108AA8MXU0 73 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 H0YIV9 168 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 RD3LP0DJH9 198 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 CPEP16870 476 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 ETV1P50549 477 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 UBE2G1P62253 170 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 TMEM207Q6UWW9 146 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 ZNF767PQ75MW2 155 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 RNF113BQ8IZP6 322 aaKnown RBP12.55□□□□□ -0.4
VAPA-202ENST00000400000 SLCO1B1Q9Y6L6 691 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 ARNTLO00327 626 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 GPANK1O95872 356 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 CST5P28325 142 aaPredicted RBP12.55□□□□□ -0.4
VAPA-202ENST00000400000 OR10A3P58181 314 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 SPINK9Q5DT21 86 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 PLXDC2Q6UX71 529 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.55□□□□□ -0.4
VAPA-202ENST00000400000 MYEOVQ96EZ4 313 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 TSTD3H0UI37 97 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 H3BMH7 237 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 RPL27P61353 136 aaKnown RBP12.55□□□□□ -0.4
VAPA-202ENST00000400000 SSX7Q7RTT5 188 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 CHRNA9Q9UGM1 479 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 MOKQ9UQ07 419 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 ASCC3Q8N3C0 2202 aaKnown RBP12.55□□□□□ -0.4
VAPA-202ENST00000400000 DTYMKP23919 212 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 GPM6AP51674 278 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 SMAD4Q13485 552 aaKnown RBP12.55□□□□□ -0.4
VAPA-202ENST00000400000 LCN15Q6UWW0 184 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms