RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 TIA1P31483 386 aaKnown RBP eCLIP7.94□□□□□ -1.14
CACNA1C-220ENST00000399655 ADRA1BP35368 520 aa7.94□□□□□ -1.14
CACNA1C-220ENST00000399655 C18orf63Q68DL7 685 aa7.94□□□□□ -1.14
CACNA1C-220ENST00000399655 CDX2Q99626 313 aaPredicted RBP7.94□□□□□ -1.14
CACNA1C-220ENST00000399655 ALKBH7Q9BT30 221 aaPredicted RBP7.94□□□□□ -1.14
CACNA1C-220ENST00000399655 RARRES3Q9UL19 164 aa7.94□□□□□ -1.14
CACNA1C-220ENST00000399655 RNASET2O00584 256 aaKnown RBP7.94□□□□□ -1.14
CACNA1C-220ENST00000399655 NME2P1O60361 137 aa7.94□□□□□ -1.14
CACNA1C-220ENST00000399655 S1PR4O95977 384 aa7.94□□□□□ -1.14
CACNA1C-220ENST00000399655 RPA2P15927 270 aa7.94□□□□□ -1.14
CACNA1C-220ENST00000399655 RELQ04864 619 aaPredicted RBP7.94□□□□□ -1.14
CACNA1C-220ENST00000399655 LINC00116Q8NCU8 138 aa7.94□□□□□ -1.14
CACNA1C-220ENST00000399655 OR5AU1Q8NGC0 362 aa7.94□□□□□ -1.14
CACNA1C-220ENST00000399655 OR2A14Q96R47 310 aa7.94□□□□□ -1.14
CACNA1C-220ENST00000399655 LOC100289279A0A1B0GTE1 492 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 MFNGO00587 321 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 SLCO2B1O94956 709 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 ZP3P21754 424 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 CXCL9Q07325 125 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 EMC10Q5UCC4 262 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 ANAPC13Q9BS18 74 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 SH3BGRL3Q9H299 93 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 NAGKQ9UJ70 344 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 LSM2Q9Y333 95 aaKnown RBP7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 ATP10BO94823 1461 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 UPK1AO00322 258 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 HIST1H1EP10412 219 aaKnown RBP7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 CD80P33681 288 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 MEOX2P50222 304 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 HYAL2Q12891 473 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 EML3Q32P44 896 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 NKAIN1Q4KMZ8 207 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 OR2L13Q8N349 312 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 ZFPM2Q8WW38 1151 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 AMBRA1Q9C0C7 1298 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 CD84Q9UIB8 345 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 EIF4E2O60573 245 aaKnown RBP7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 LIMS3P0CW19 117 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 LIMS4P0CW20 117 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 ABOP16442 354 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 PARS2Q7L3T8 475 aaKnown RBP7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 CALHM3Q86XJ0 350 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 SLC30A3Q99726 388 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 ZFYVE21Q9BQ24 234 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 CACNG5Q9UF02 275 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 SEMA4FO95754 770 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 SLC25A4P12235 298 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 AQP6Q13520 282 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 SCARF1Q14162 830 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 TBC1D28Q2M2D7 210 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 MOB3CQ70IA8 216 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 ZNF765Q7L2R6 523 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 TMEM123Q8N131 208 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 ALG3Q92685 438 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 DPH3Q96FX2 82 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 SIRT7Q9NRC8 400 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 TMEM269A0A1B0GVZ9 245 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 B4DEV8 164 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 VNN1O95497 513 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 SNRPBP14678 240 aaKnown RBP7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 PSAPL1Q6NUJ1 521 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 PWWP2BQ6NUJ5 590 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 CFAP52Q8N1V2 620 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 A0A1W2PNV4 684 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 HPP00738 406 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 SEC13P55735 322 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 TMEM207Q6UWW9 146 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 RANBP9Q96S59 729 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 FGF21Q9NSA1 209 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 SPATA31A1Q5TZJ5 1347 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 DGKEP52429 567 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 RABGGTBP53611 331 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 SLC38A5Q8WUX1 472 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 DOCK3Q8IZD9 2030 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 TRBV23OR9-2A0A075B6M9 112 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 ALOX12BO75342 701 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 CD46P15529 392 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 PCBP2Q15366 365 aaKnown RBP eCLIP7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 GABRA6Q16445 453 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 PRSS8Q16651 343 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 FAM74A3Q4VXF1 159 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 H1FXQ92522 213 aaKnown RBP7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 SPANXDQ9BXN6 97 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 NRIP3Q9NQ35 241 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 NRKQ7Z2Y5 1582 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 CDC14CA4D256 554 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 C9JVG2 144 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 CYR61O00622 381 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 CHRM2P08172 466 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 FOLR3P41439 243 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 BTG1P62324 171 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 TRMT12Q53H54 448 aaKnown RBP7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 PLXDC2Q6UX71 529 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 TMEM139Q8IV31 216 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 SYT8Q8NBV8 401 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 MRGPRDQ8TDS7 321 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 HIST1H4GQ99525 98 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 SELENOIQ9C0D9 397 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 RCE1Q9Y256 329 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 DNAJC15Q9Y5T4 150 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms