RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 POU2F3Q9UKI9 436 aa5.55□□□□□ -1.52
TRAPPC13-202ENST00000399438 YARS2Q9Y2Z4 477 aaKnown RBP5.55□□□□□ -1.52
TRAPPC13-202ENST00000399438 MEMO1Q9Y316 297 aa5.55□□□□□ -1.52
TRAPPC13-202ENST00000399438 HELZP42694 1942 aaKnown RBP5.55□□□□□ -1.52
TRAPPC13-202ENST00000399438 MED12Q93074 2177 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 A0A1W2PNV4 684 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 FRG2CA6NGY1 282 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 SLC28A2O43868 658 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 AIREO43918 545 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 SC5DO75845 299 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 GATBO75879 557 aaKnown RBP5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 IFNA5P01569 189 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 CISD3P0C7P0 127 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 C1GALT1C1LP0DN25 315 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 GPX2P18283 190 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 CNR2P34972 360 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 TAS2R60P59551 318 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 CDK3Q00526 305 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 LTB4RQ15722 352 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 DCDC5Q6ZRR9 648 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 H2BFWTQ7Z2G1 175 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 DPPA2Q7Z7J5 298 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 RANBP3LQ86VV4 465 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 SVOPLQ8N434 492 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 STX19Q8N4C7 294 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 LINC01555Q8NAE3 123 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 PHF10Q8WUB8 498 aaKnown RBP5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 PATE1Q8WXA2 126 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 MOB3AQ96BX8 217 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 PELI1Q96FA3 418 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 TMEM19Q96HH6 336 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 RNF170Q96K19 258 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 FYTTD1Q96QD9 318 aaKnown RBP5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 REEP4Q9H6H4 257 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 MYOZ1Q9NP98 299 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 ACOT13Q9NPJ3 140 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 TMEM74BQ9NUR3 256 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 NDRG2Q9UN36 371 aaKnown RBP5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 ARHGEF17Q96PE2 2063 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 SPAG17Q6Q759 2223 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 NPIPA5A0A0B4J1W7 369 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 EFCAB9A8MZ26 197 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 C5orf58C9J3I9 102 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 ANHXE9PGG2 379 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 GNB5O14775 395 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 FFAR1O14842 300 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 RBMXL2O75526 392 aaKnown RBP5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 EML2O95834 649 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 CT62P0C5K7 136 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 GYPEP15421 78 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 ZP3P21754 424 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 CAV3P56539 151 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 SLC35A2P78381 396 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 TNFRSF9Q07011 255 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 ST3GAL4Q11206 333 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 STX4Q12846 297 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 GGTA1PQ4G0N0 100 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 C22orf34Q6ZV56 151 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 FAM131CQ96AQ9 280 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 ZHX1-C8orf76Q96EF9 292 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 DOHHQ9BU89 302 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 ZNF426Q9BUY5 554 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 HRASLSQ9HDD0 168 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 GIN1Q9NXP7 522 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 SCN3BQ9NY72 215 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 DIMT1Q9UNQ2 313 aaKnown RBP5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 PPP1R3CQ9UQK1 317 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 TDRD6O60522 2096 aaKnown RBP5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 DENND4CQ5VZ89 1909 aa5.54□□□□□ -1.52
TRAPPC13-202ENST00000399438 RGS5O15539 181 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 PLPP2O43688 288 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 DPM1O60762 260 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 LATS1O95835 1130 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 MPC1LP0DKB6 136 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 SPNP16150 400 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 SSTR4P31391 388 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 SSR2P43308 183 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 SERPINB10P48595 397 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 FLI1Q01543 452 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 EGR3Q06889 387 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 SRSF1Q07955 248 aaKnown RBP eCLIP5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 INSL4Q14641 139 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 SMCO1Q147U7 214 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 TAB1Q15750 504 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 C20orf204Q6ZNR8 217 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 SERPINA11Q86U17 422 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 DMRTC2Q8IXT2 367 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 EXD3Q8N9H8 876 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 OR4E2Q8NGC2 313 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 OR10G6Q8NH81 332 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 NANPQ8TBE9 248 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 RAB2BQ8WUD1 216 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 SLC38A5Q8WUX1 472 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 C22orf15Q8WYQ4 148 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 OR8D1Q8WZ84 308 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 CTHRC1Q96CG8 243 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 LGALS12Q96DT0 336 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 VSTM2LQ96N03 204 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 PTDSS2Q9BVG9 487 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms