RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 ARL5BQ96KC2 179 aa20.66■□□□□ 0.9
RABGGTA-202ENST00000399409 ALX4Q9H161 411 aaPredicted RBP20.66■□□□□ 0.9
RABGGTA-202ENST00000399409 FANCFQ9NPI8 374 aa20.66■□□□□ 0.9
RABGGTA-202ENST00000399409 ZNF107Q9UII5 783 aaPredicted RBP20.66■□□□□ 0.9
RABGGTA-202ENST00000399409 FER1L5A0AVI2 2057 aa20.66■□□□□ 0.9
RABGGTA-202ENST00000399409 RPS10-NUDT3A0A1W2PQS6 291 aa20.66■□□□□ 0.9
RABGGTA-202ENST00000399409 VSTM2BA6NLU5 285 aa20.66■□□□□ 0.9
RABGGTA-202ENST00000399409 NFYAP23511 347 aaPredicted RBP20.66■□□□□ 0.9
RABGGTA-202ENST00000399409 MSX1P28360 303 aa20.66■□□□□ 0.9
RABGGTA-202ENST00000399409 AP2S1P53680 142 aaPredicted RBP20.66■□□□□ 0.9
RABGGTA-202ENST00000399409 NKAIN1Q4KMZ8 207 aa20.66■□□□□ 0.9
RABGGTA-202ENST00000399409 GABRG1Q8N1C3 465 aa20.66■□□□□ 0.9
RABGGTA-202ENST00000399409 OR4D10Q8NGI6 311 aa20.66■□□□□ 0.9
RABGGTA-202ENST00000399409 ASB13Q8WXK3 278 aa20.66■□□□□ 0.9
RABGGTA-202ENST00000399409 PNPLA2Q96AD5 504 aa20.66■□□□□ 0.9
RABGGTA-202ENST00000399409 ALKBH4Q9NXW9 302 aa20.66■□□□□ 0.9
RABGGTA-202ENST00000399409 MED11Q9P086 117 aa20.66■□□□□ 0.9
RABGGTA-202ENST00000399409 L7N2F9 121 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 LDLRAD4O15165 306 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 RGS11O94810 467 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 CD3DP04234 171 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 GPR85P60893 370 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 POU3F1Q03052 451 aaPredicted RBP20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 FMODQ06828 376 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 LRFN4Q6PJG9 635 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 OR5L2Q8NGL0 311 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 C17orf50Q8WW18 174 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 SEH1LQ96EE3 360 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 C5orf34Q96MH7 638 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 DUSP15Q9H1R2 295 aaPredicted RBP20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 APMAPQ9HDC9 416 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 GLTPQ9NZD2 209 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 B3GALT5Q9Y2C3 310 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 TMEM269A0A1B0GVZ9 245 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 LOC390937A0A1W2PQ73 354 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 C2orf72A6NCS6 295 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 H2BFMP0C1H6 154 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 POU4F3Q15319 338 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 MPPED2Q15777 294 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 OR52B4Q8NGK2 314 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 RNF133Q8WVZ7 376 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 ELMOD3Q96FG2 381 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 NPAS1Q99742 590 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 CMKLR1Q99788 373 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 PISDQ9UG56 409 aa20.65■□□□□ 0.9
RABGGTA-202ENST00000399409 LIPT2A6NK58 231 aa20.64■□□□□ 0.89
RABGGTA-202ENST00000399409 ZNF354AO60765 605 aaPredicted RBP20.64■□□□□ 0.89
RABGGTA-202ENST00000399409 FOXF1Q12946 379 aa20.64■□□□□ 0.89
RABGGTA-202ENST00000399409 SMAD2Q15796 467 aaKnown RBP20.64■□□□□ 0.89
RABGGTA-202ENST00000399409 SLC25A53Q5H9E4 307 aa20.64■□□□□ 0.89
RABGGTA-202ENST00000399409 ZNF627Q7L945 461 aa20.64■□□□□ 0.89
RABGGTA-202ENST00000399409 CCDC107Q8WV48 283 aa20.64■□□□□ 0.89
RABGGTA-202ENST00000399409 RELTQ969Z4 430 aa20.64■□□□□ 0.89
RABGGTA-202ENST00000399409 MRPS18BQ9Y676 258 aaKnown RBP20.64■□□□□ 0.89
RABGGTA-202ENST00000399409 TRBV11-1A0A0K0K1C0 115 aa20.64■□□□□ 0.89
RABGGTA-202ENST00000399409 OR6C65A6NJZ3 312 aa20.64■□□□□ 0.89
RABGGTA-202ENST00000399409 PNLIPP16233 465 aa20.64■□□□□ 0.89
RABGGTA-202ENST00000399409 RAB6AP20340 208 aa20.64■□□□□ 0.89
RABGGTA-202ENST00000399409 MMP16P51512 607 aa20.64■□□□□ 0.89
RABGGTA-202ENST00000399409 SQSTM1Q13501 440 aa20.64■□□□□ 0.89
RABGGTA-202ENST00000399409 ARSKQ6UWY0 536 aa20.64■□□□□ 0.89
RABGGTA-202ENST00000399409 LINC00346Q8IVM7 164 aa20.64■□□□□ 0.89
RABGGTA-202ENST00000399409 OR2AK2Q8NG84 335 aa20.64■□□□□ 0.89
RABGGTA-202ENST00000399409 THAP3Q8WTV1 239 aaPredicted RBP20.64■□□□□ 0.89
RABGGTA-202ENST00000399409 EXO5Q9H790 373 aa20.64■□□□□ 0.89
RABGGTA-202ENST00000399409 CGGBP1Q9UFW8 167 aaPredicted RBP20.64■□□□□ 0.89
RABGGTA-202ENST00000399409 EXPH5Q8NEV8 1989 aa20.63■□□□□ 0.89
RABGGTA-202ENST00000399409 ABCA7Q8IZY2 2146 aa20.63■□□□□ 0.89
RABGGTA-202ENST00000399409 ALPK2Q86TB3 2170 aa20.63■□□□□ 0.89
RABGGTA-202ENST00000399409 A0A1W2PNV4 684 aa20.63■□□□□ 0.89
RABGGTA-202ENST00000399409 MEIS3P1A6NDR6 274 aa20.63■□□□□ 0.89
RABGGTA-202ENST00000399409 HMSDA8MTL9 139 aa20.63■□□□□ 0.89
RABGGTA-202ENST00000399409 SHOXO15266 292 aa20.63■□□□□ 0.89
RABGGTA-202ENST00000399409 DOK2O60496 412 aa20.63■□□□□ 0.89
RABGGTA-202ENST00000399409 ITGB2P05107 769 aa20.63■□□□□ 0.89
RABGGTA-202ENST00000399409 CXCL2P19875 107 aa20.63■□□□□ 0.89
RABGGTA-202ENST00000399409 FOXL2P58012 376 aa20.63■□□□□ 0.89
RABGGTA-202ENST00000399409 PAPD4Q6PIY7 484 aaKnown RBP20.63■□□□□ 0.89
RABGGTA-202ENST00000399409 TMEM205Q6UW68 189 aa20.63■□□□□ 0.89
RABGGTA-202ENST00000399409 OR10H5Q8NGA6 315 aa20.63■□□□□ 0.89
RABGGTA-202ENST00000399409 MRGPRX4Q96LA9 322 aa20.63■□□□□ 0.89
RABGGTA-202ENST00000399409 SLC25A21Q9BQT8 299 aaPredicted RBP20.63■□□□□ 0.89
RABGGTA-202ENST00000399409 GSX2Q9BZM3 304 aa20.63■□□□□ 0.89
RABGGTA-202ENST00000399409 TTYH1Q9H313 450 aaPredicted RBP20.63■□□□□ 0.89
RABGGTA-202ENST00000399409 SDHAF3Q9NRP4 125 aa20.63■□□□□ 0.89
RABGGTA-202ENST00000399409 KLHL13Q9P2N7 655 aa20.63■□□□□ 0.89
RABGGTA-202ENST00000399409 WNT16Q9UBV4 365 aa20.63■□□□□ 0.89
RABGGTA-202ENST00000399409 VDAC3Q9Y277 283 aa20.63■□□□□ 0.89
RABGGTA-202ENST00000399409 UNC13CQ8NB66 2214 aa20.63■□□□□ 0.89
RABGGTA-202ENST00000399409 DCDC2BA2VCK2 349 aa20.62■□□□□ 0.89
RABGGTA-202ENST00000399409 MCRIP1C9JLW8 97 aa20.62■□□□□ 0.89
RABGGTA-202ENST00000399409 FOSL2P15408 326 aa20.62■□□□□ 0.89
RABGGTA-202ENST00000399409 ZNF41P51814 821 aaPredicted RBP20.62■□□□□ 0.89
RABGGTA-202ENST00000399409 HDDC2Q7Z4H3 204 aa20.62■□□□□ 0.89
RABGGTA-202ENST00000399409 JAGN1Q8N5M9 183 aa20.62■□□□□ 0.89
RABGGTA-202ENST00000399409 PMEPA1Q969W9 287 aa20.62■□□□□ 0.89
RABGGTA-202ENST00000399409 C1orf198Q9H425 327 aa20.62■□□□□ 0.89
RABGGTA-202ENST00000399409 PPP4R1LQ9P1A2 415 aa20.62■□□□□ 0.89
RABGGTA-202ENST00000399409 OPN4Q9UHM6 478 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms