RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 FOLR3P41439 243 aa15.81■□□□□ 0.12
HLA-DQB1-204ENST00000399084 DNASE1L1P49184 302 aa15.81■□□□□ 0.12
HLA-DQB1-204ENST00000399084 MECP2P51608 486 aaKnown RBP15.81■□□□□ 0.12
HLA-DQB1-204ENST00000399084 DSCR4P56555 118 aaPredicted RBP15.81■□□□□ 0.12
HLA-DQB1-204ENST00000399084 CLRN1P58418 232 aa15.81■□□□□ 0.12
HLA-DQB1-204ENST00000399084 SF3B4Q15427 424 aaKnown RBP eCLIP15.81■□□□□ 0.12
HLA-DQB1-204ENST00000399084 TMPPEQ6ZT21 453 aa15.81■□□□□ 0.12
HLA-DQB1-204ENST00000399084 NOXO1Q8NFA2 376 aa15.81■□□□□ 0.12
HLA-DQB1-204ENST00000399084 PAQR8Q8TEZ7 354 aa15.81■□□□□ 0.12
HLA-DQB1-204ENST00000399084 SMAD5Q99717 465 aaKnown RBP15.81■□□□□ 0.12
HLA-DQB1-204ENST00000399084 MED29Q9NX70 200 aa15.81■□□□□ 0.12
HLA-DQB1-204ENST00000399084 PAQR5Q9NXK6 330 aaPredicted RBP15.81■□□□□ 0.12
HLA-DQB1-204ENST00000399084 SLC39A1Q9NY26 324 aa15.81■□□□□ 0.12
HLA-DQB1-204ENST00000399084 MTFP1Q9UDX5 166 aa15.81■□□□□ 0.12
HLA-DQB1-204ENST00000399084 GTF2A1LQ9UNN4 478 aa15.81■□□□□ 0.12
HLA-DQB1-204ENST00000399084 EMC9Q9Y3B6 208 aa15.81■□□□□ 0.12
HLA-DQB1-204ENST00000399084 DNAH14Q0VDD8 3507 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 TRAV6A0A075B6T7 132 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 LOC390937A0A1W2PQ73 354 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 ZNF17P17021 662 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 ZNF28P17035 718 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 ZNF43P17038 809 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 MFGE8Q08431 387 aaPredicted RBP15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 HIST3H3Q16695 136 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 C2orf76Q3KRA6 126 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 C1orf100Q5SVJ3 147 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 METTL11BQ5VVY1 283 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 LRFN4Q6PJG9 635 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 C11orf40Q8WZ69 217 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 ATOH1Q92858 354 aaPredicted RBP15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 OR5B2Q96R09 309 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 AUNIPQ9H7T9 357 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 AKIRIN1Q9H9L7 192 aaPredicted RBP15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 ZNF107Q9UII5 783 aaPredicted RBP15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 RCE1Q9Y256 329 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 HS3ST3B1Q9Y662 390 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 A0A087WV48 116 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 A0A1B0GUH1 482 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 ZNF726A6NNF4 738 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 DNPH1O43598 174 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 TRAF3IP2O43734 574 aaPredicted RBP15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 CTAG2O75638 210 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 MPZL1O95297 269 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 PDGFBP01127 241 aaPredicted RBP15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 ANXA3P12429 323 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 HTR2CP28335 458 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 POU3F4P49335 361 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 FMODQ06828 376 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 SLC25A47Q6Q0C1 308 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 LUZP2Q86TE4 346 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 RPS19BP1Q86WX3 136 aaKnown RBP15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 CDH26Q8IXH8 852 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 IZUMO1Q8IYV9 350 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 ELMOD2Q8IZ81 293 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 OR1J4Q8NGS1 313 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 OR13C3Q8NGS6 347 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 OR2AJ1Q8NGZ0 328 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 SLAMF6Q96DU3 332 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 TMEM246Q9BRR3 403 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 SCPEP1Q9HB40 452 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 SH2D2AQ9NP31 389 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 PRDM6Q9NQX0 595 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 FBXL2Q9UKC9 423 aa15.8■□□□□ 0.12
HLA-DQB1-204ENST00000399084 EYSQ5T1H1 3165 aa15.79■□□□□ 0.12
HLA-DQB1-204ENST00000399084 RALGAPA1Q6GYQ0 2036 aa15.79■□□□□ 0.12
HLA-DQB1-204ENST00000399084 NSG1A0A0A6YYJ2 146 aa15.79■□□□□ 0.12
HLA-DQB1-204ENST00000399084 GJE1A6NN92 205 aa15.79■□□□□ 0.12
HLA-DQB1-204ENST00000399084 SULT2B1O00204 365 aa15.79■□□□□ 0.12
HLA-DQB1-204ENST00000399084 SCGNO76038 276 aa15.79■□□□□ 0.12
HLA-DQB1-204ENST00000399084 MT-ND4P03905 459 aa15.79■□□□□ 0.12
HLA-DQB1-204ENST00000399084 ITGA5P08648 1049 aa15.79■□□□□ 0.12
HLA-DQB1-204ENST00000399084 GSTT2P0CG29 244 aa15.79■□□□□ 0.12
HLA-DQB1-204ENST00000399084 RAB6AP20340 208 aa15.79■□□□□ 0.12
HLA-DQB1-204ENST00000399084 MLF1P58340 268 aa15.79■□□□□ 0.12
HLA-DQB1-204ENST00000399084 POU4F3Q15319 338 aa15.79■□□□□ 0.12
HLA-DQB1-204ENST00000399084 ZNF528Q3MIS6 628 aa15.79■□□□□ 0.12
HLA-DQB1-204ENST00000399084 DCAF12Q5T6F0 453 aa15.79■□□□□ 0.12
HLA-DQB1-204ENST00000399084 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.79■□□□□ 0.12
HLA-DQB1-204ENST00000399084 SERPINA12Q8IW75 414 aa15.79■□□□□ 0.12
HLA-DQB1-204ENST00000399084 DNAAF1Q8NEP3 725 aa15.79■□□□□ 0.12
HLA-DQB1-204ENST00000399084 OR51D1Q8NGF3 324 aa15.79■□□□□ 0.12
HLA-DQB1-204ENST00000399084 INTS12Q96CB8 462 aaKnown RBP15.79■□□□□ 0.12
HLA-DQB1-204ENST00000399084 TMEM41AQ96HV5 264 aa15.79■□□□□ 0.12
HLA-DQB1-204ENST00000399084 NAA11Q9BSU3 229 aaPredicted RBP15.79■□□□□ 0.12
HLA-DQB1-204ENST00000399084 C20orf85Q9H1P6 137 aa15.79■□□□□ 0.12
HLA-DQB1-204ENST00000399084 LOC107986453A0A1B0GWG9 222 aa15.78■□□□□ 0.12
HLA-DQB1-204ENST00000399084 PATE3B3GLJ2 98 aa15.78■□□□□ 0.12
HLA-DQB1-204ENST00000399084 CBR3O75828 277 aa15.78■□□□□ 0.12
HLA-DQB1-204ENST00000399084 IL5P05113 134 aa15.78■□□□□ 0.12
HLA-DQB1-204ENST00000399084 CCL4P13236 92 aa15.78■□□□□ 0.12
HLA-DQB1-204ENST00000399084 GABRA1P14867 456 aa15.78■□□□□ 0.12
HLA-DQB1-204ENST00000399084 CSNK2A1P68400 391 aaPredicted RBP15.78■□□□□ 0.12
HLA-DQB1-204ENST00000399084 H3F3AP84243 136 aa15.78■□□□□ 0.12
HLA-DQB1-204ENST00000399084 TMEM176BQ3YBM2 270 aaPredicted RBP15.78■□□□□ 0.12
HLA-DQB1-204ENST00000399084 RAB12Q6IQ22 244 aa15.78■□□□□ 0.12
HLA-DQB1-204ENST00000399084 OR11G2Q8NGC1 345 aa15.78■□□□□ 0.12
HLA-DQB1-204ENST00000399084 SLC25A28Q96A46 364 aa15.78■□□□□ 0.12
HLA-DQB1-204ENST00000399084 FOXN4Q96NZ1 517 aa15.78■□□□□ 0.12
HLA-DQB1-204ENST00000399084 SORCS2Q96PQ0 1159 aa15.78■□□□□ 0.12
HLA-DQB1-204ENST00000399084 FAM117AQ9C073 453 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms