RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 SLIRPQ9GZT3 109 aaKnown RBP12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 RBM38Q9H0Z9 239 aaKnown RBP12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 C20orf141Q9NUB4 165 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 OR14J1Q9UGF5 321 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 A0A1W2PPV9 198 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 ANKRD61A6NGH8 418 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 BET1O15155 118 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 STK17BO94768 372 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 APEHP13798 732 aaKnown RBP12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 OR10A3P58181 314 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 HEPHL1Q6MZM0 1159 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 LPCAT3Q6P1A2 487 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 SEC22AQ96IW7 307 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 C1orf123Q9NWV4 160 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 SLC22A13Q9Y226 551 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 SPAG17Q6Q759 2223 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 TRAV1-2A0A0B4J238 106 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 OR6C65A6NJZ3 312 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 F8W036 122 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 FOLR1P15328 257 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 RPS18P62269 152 aaKnown RBP12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 CDC20Q12834 499 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 TRA2AQ13595 282 aaKnown RBP eCLIP12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 KTI12Q96EK9 354 aaPredicted RBP12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 MENTQ9BUN1 341 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 JAM3Q9BX67 310 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 A0A1B0GV50 99 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 M0R135 149 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 CBR3O75828 277 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 PPP3CBP16298 524 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 SLC25A1P53007 311 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 PPP1CAP62136 330 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 MFGE8Q08431 387 aaPredicted RBP12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 STAC2Q6ZMT1 411 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 WDR5BQ86VZ2 330 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 OR51S1Q8NGJ8 323 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 KCNE4Q8WWG9 221 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 ZNF799Q96GE5 643 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 SLC25A31Q9H0C2 315 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 ZCCHC4Q9H5U6 513 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 FBXO34Q9NWN3 711 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 FBXL2Q9UKC9 423 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 TIMM10BQ9Y5J6 103 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 STMND1H3BQB6 276 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 CXCL13O43927 109 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 CBX7O95931 251 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 ACSM1Q08AH1 577 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 GUSBP11Q6P575 273 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 OCSTAMPQ9BR26 566 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 SEC22CQ9BRL7 303 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 ABHD6Q9BV23 337 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 SLC5A6Q9Y289 635 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 IGHV3-9P01782 118 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 CSF3P09919 207 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 LIMS3P0CW19 117 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 LIMS4P0CW20 117 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 LANCL3Q6ZV70 420 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 PRSS35Q8N3Z0 413 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 LILRB4Q8NHJ6 448 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 CNTNAP3BQ96NU0 1288 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 SRRQ9GZT4 340 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 TRAPPC2LQ9UL33 140 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 PCM1Q15154 2024 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 IL11RAQ14626 422 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 ZNF141Q15928 474 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 BCL2A1Q16548 175 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 DND1Q8IYX4 353 aaKnown RBP12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 CMTM4Q8IZR5 234 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 BCO1Q9HAY6 547 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 SLCO1C1Q9NYB5 712 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 MYOTQ9UBF9 498 aa12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 ING1Q9UK53 422 aaPredicted RBP12.89□□□□□ -0.35
PCDHGA11-201ENST00000398587 ALG1L2C9J202 215 aa12.88□□□□□ -0.35
PCDHGA11-201ENST00000398587 TNFSF14O43557 240 aa12.88□□□□□ -0.35
PCDHGA11-201ENST00000398587 CT62P0C5K7 136 aa12.88□□□□□ -0.35
PCDHGA11-201ENST00000398587 EPXP11678 715 aa12.88□□□□□ -0.35
PCDHGA11-201ENST00000398587 ECI1P42126 302 aa12.88□□□□□ -0.35
PCDHGA11-201ENST00000398587 SRPXP78539 464 aa12.88□□□□□ -0.35
PCDHGA11-201ENST00000398587 MESP2Q0VG99 397 aa12.88□□□□□ -0.35
PCDHGA11-201ENST00000398587 DYRK1AQ13627 763 aa12.88□□□□□ -0.35
PCDHGA11-201ENST00000398587 TOMM34Q15785 309 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA11-201ENST00000398587 FAM27D1Q5T7N8 215 aa12.88□□□□□ -0.35
PCDHGA11-201ENST00000398587 MAFAQ8NHW3 353 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA11-201ENST00000398587 DOK1Q99704 481 aa12.88□□□□□ -0.35
PCDHGA11-201ENST00000398587 ATF6BQ99941 703 aa12.88□□□□□ -0.35
PCDHGA11-201ENST00000398587 ARRDC1-AS1Q9H2J1 176 aa12.88□□□□□ -0.35
PCDHGA11-201ENST00000398587 GPR84Q9NQS5 396 aa12.88□□□□□ -0.35
PCDHGA11-201ENST00000398587 ZNF728P0DKX0 622 aa12.88□□□□□ -0.35
PCDHGA11-201ENST00000398587 TGM4P49221 684 aa12.88□□□□□ -0.35
PCDHGA11-201ENST00000398587 ZNF117Q03924 483 aa12.88□□□□□ -0.35
PCDHGA11-201ENST00000398587 BEX5Q5H9J7 111 aa12.88□□□□□ -0.35
PCDHGA11-201ENST00000398587 CCDC190Q86UF4 302 aa12.88□□□□□ -0.35
PCDHGA11-201ENST00000398587 SMRP1Q8NCR6 262 aa12.88□□□□□ -0.35
PCDHGA11-201ENST00000398587 OR52H1Q8NGJ2 320 aa12.88□□□□□ -0.35
PCDHGA11-201ENST00000398587 OIT3Q8WWZ8 545 aa12.88□□□□□ -0.35
PCDHGA11-201ENST00000398587 BANF2Q9H503 90 aa12.88□□□□□ -0.35
PCDHGA11-201ENST00000398587 DHHO43323 396 aa12.88□□□□□ -0.35
PCDHGA11-201ENST00000398587 TIMM8AO60220 97 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms